Phaeobacter inhibens 2.10: PGA2_c17170
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Entry
PGA2_c17170 CDS
T02193
Symbol
uvrA
Name
(GenBank) uvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGA2_c17170 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgl03400
]
PGA2_c17170 (uvrA)
DNA repair and recombination proteins [BR:
pgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGA2_c17170 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PGA2_c17170 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
DUF4350
nSTAND3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AFO87714
UniProt:
A0AA85Z648
LinkDB
All DBs
Position
complement(1899928..1902819)
Genome browser
AA seq
963 aa
AA seq
DB search
MKSIEVRGAREHNLKNIDVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLDMMEKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARAGTPYS
PATGMPIEAQQVQDMVDRIMTLEEGTRGFLLAPIVRDRKGEYRKEFLELRKQGFQRVKVD
GEFYELDEPPTLDKKFRHDIDVVVDRLVVREGLETRLADSLRTALDLADGIAILETAPRA
AEGEEAPEPERITFSENFACPVSGFTIPEIEPRLFSFNAPFGACPECDGLGVELFFDERL
VVPDQNLKIYDGALAPWRKGKSPYFLQTIEAIAKHYQFNKNTKWKDLPNKVQQVFLRGSG
DEEIKFRYDEGGRVYEVTRVFEGVIPNMERRYRETDSNWIREEFERYQNNRSCGVCEGYR
LREEALAVKIGPAGGRPDQLLHVGQVVQMSIREALAWIEDVPNQLSAQKQEIARAIVKEI
RERLGFLNNVGLEYLTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRD
NDRLLETLKNLRDQGNTVIVVEHDEDAIREADYVFDIGPGAGVHGGQVVSHGTPEMVAAD
EGSITGQYLSGTREIAVPSVRRKGNGKSVKVVKATGNNLKNVTAEFPLGKFLCVSGVSGG
GKSTLTIETLFKTASMRLNGARQTPAPCETIKGLEHLDKVIDIDQRPIGRTPRSNPATYT
GAFTPIREWFAGLPESKTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVECET
CKGARYNRETLEIQFKGKSIADVLDMTVEDAQQFFQAVPSIRDKMDALMRVGLGYIKVGQ
QATTLSGGEAQRVKLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQGNSV
VVIEHNLDVIKTADWIIDIGPEGGDGGGEIVAAGTPEDVAATKGSHTGHYLKEILDARSL
AAE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatcgatcgaagtgcgcggtgcgcgcgagcacaacctgaaaaacatcgacgtggat
atcccgcgcgatcagctggtggtgatcaccggattgtccggctcgggcaagtccagcctc
gcgtttgataccatctatgccgagggccagcgccgctatgtcgagagcctgtctgcctac
gcgcgccagttcctcgatatgatggaaaagccggatgtggatcacatcagtggcctgtcg
cccgcgatctccattgagcagaaaaccacctcgaaaaacccgcgatcgactgtgggcacc
gtgaccgagatttacgactatctgcgtctgttgtttgcccgcgccgggacgccctattcg
ccggccaccggaatgccgattgaggcgcagcaggtgcaggatatggtcgaccggatcatg
acgctggaggagggcacccgtggcttcctgctggcgcccatcgtgcgcgaccgtaagggg
gaatatcgcaaggaattcctggagctgcgcaagcaggggttccagcgcgtgaaggtcgat
ggcgaattctacgaactggatgagccgccgacattggacaagaagttccgccatgacatc
gacgtcgttgttgatcgtctggtggtgcgcgaggggctggaaacccggctcgccgacagc
ctgcggaccgcgctggatctggccgatgggattgccattctggaaaccgccccacgcgcg
gcggagggtgaagaggcgcctgagcctgagcggatcaccttttccgagaattttgcctgc
ccggtcagcggtttcaccatccctgagatcgaaccgcggctgttttcctttaacgcgccg
tttggcgcttgccccgaatgtgacggtctgggggttgagctgttctttgacgagcgtctg
gtggtgccggatcagaacctgaaaatctatgacggggcgctggccccctggcgcaagggc
aaatcgccctattttctgcagaccatcgaagccatcgccaagcattatcagttcaacaaa
aacaccaagtggaaagacctgccgaacaaggtgcagcaggtgttcctgcgcggctccggc
gacgaggaaatcaagttccgctacgatgaaggcggccgcgtctatgaggtgacgcgcgtc
ttcgaaggggtcattccgaatatggaacggcgctaccgggagacggattccaactggatt
cgcgaagaattcgaacgctaccagaacaaccggtcctgcggtgtctgcgaaggctatcgt
ctgcgcgaagaggcgctggcggttaaaatcggtcctgctggtggccgcccggatcaactg
ctgcatgtggggcaggtggtgcagatgtcgatccgcgaggcgctggcctggatcgaggat
gtgcccaatcagctgtcggcgcagaaacaggaaattgcccgcgccatcgtgaaggaaatt
cgcgaacggcttgggtttctgaacaatgtcggtctggaatatctgaccctgagccgcaat
gccggtacgctctccggtggggagagccagcggatccgtctggcatcacagatcggctct
ggtctgacaggcgttctttatgtgctggatgagccgtccatcgggctgcatcagcgtgac
aatgaccggttgctggaaaccctgaaaaacctgcgggatcagggtaatacggtgatcgtg
gtcgaacatgacgaggacgcgatccgagaggcggattatgtctttgatatcggtccgggt
gcgggtgtgcacggcgggcaggtggtcagccacggcacgccagagatggttgccgctgat
gaagggtcgatcaccgggcagtatctctccggcacacgcgagattgcggtcccatcggtg
cgccgcaagggcaatgggaaatcggtgaaggtggtcaaggccaccggcaacaacctcaag
aacgtcacggcagagttcccgctgggcaagtttctgtgtgtgtcgggcgtgtctggtggc
ggcaagtccacgctgaccattgagaccctgttcaagaccgcgtccatgcgcctgaatggc
gcacgccagaccccggccccctgtgaaaccatcaaggggctggagcatctggataaggtg
atcgacattgaccagcgcccgatcgggcgcacgccgcgttcaaatccggcgacctatacc
ggggcctttaccccgatccgcgagtggtttgccgggctgccggaatccaaaacccgtggc
tacaaaccgggccggttctccttcaacgtgaagggcggacgctgcgaagcctgtcagggc
gatggggtcatcaagatcgagatgcacttcctgccggatgtctatgtggaatgtgagacc
tgcaagggcgcgcgctacaatcgcgagacgctggaaatccagttcaagggcaagtcgatt
gccgatgtgctggatatgacggtggaggatgcgcagcagtttttccaggcggtgccgtcg
atccgtgacaagatggatgcgctgatgcgggtgggccttggctatatcaaggtcggccaa
caggcgaccaccctgtcgggcggcgaggcgcagcgggtcaaactgtcgaaggaactggcc
aaacggtccaccgggcgaacgctgtatattctggatgagccgaccacaggtctgcatttc
gaggatgttcgcaagctgctggaagtgctgcatgaactggttgaacagggcaactccgtg
gtggtgatcgagcataatctggatgtgatcaaaaccgccgactggatcattgatattggc
ccggaaggcggcgatggcggcggcgaaatcgtagccgcaggcacgccggaggatgtggcc
gcaactaagggcagccataccggtcactacctcaaagagatcctcgacgcccgcagtctc
gcggcggagtga
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