Phaeobacter inhibens 2.10: PGA2_c22220
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Entry
PGA2_c22220 CDS
T02193
Symbol
hrpB
Name
(GenBank) ATP-dependent RNA helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
3.6.4.13
]
Organism
pgl
Phaeobacter inhibens 2.10
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PGA2_c22220 (hrpB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFO88211
UniProt:
A0AA85Z662
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Position
2456416..2458920
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AA seq
834 aa
AA seq
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MTRLPIDDALPELIAALQRQKRAVLQAPPGAGKTTRVPLAMLEAGLCAGRILMLEPRRLA
ARAAAERMADTLGQPVGQTVGYRIRGEAKVSAETRIEVVTEGILTRMLQSDPDLPGVGAV
IFDEFHERSLNADFGLALCLEVAGALRDDLILLAMSATLDAAPVAELMEAPLVTSEGRSY
PVETRWLDTPLPADSRSGRGPRRLDALVDLVLRAEAESRPAGSGGRGGSEAKGGGILVFL
PGEGEIRKAAAALAGRLPGDCVVRPLFGALPFAEQRTAIQPDPVARKIVLATSIAETSLT
IQDIRVVVDMGLARRSRFDPGSGMSRLVTERVTRAEATQRQGRAGRVAAGVGYRLWTKGE
DGALAAFPPPEIQAADLTSLALELALWGAGPGDLPFLTPPPEGALKEAQALLRMLGALDG
EGRITSHGKALAKLPLHPRLGHMLARFGADAAPLAALLAERDPLRGAPVDLALRLEALRD
AKAFQRRRSYQLNIPTLERIKGEAKRLTRQARSGASSASASAAVMAAAAYPDRIGQRRKG
DAPRYVLSGGKGAVLPPEDSLAATPFLVGLDSDGNPREARLRLAAPITLSELRSAFADQI
KPQLTCVWSKRDRRVVARRQQCLGAIVLEDHIWKDVPADAIATAMLEGVRELGLRLSGAA
ARFVARVRLLQADGEDLPDFSEEALLATLEDWLLPMLDGVRSAEDWKRFDLLPALRTALS
WEQTQRLDQMAPPHFTTPLGRKVPIDYAEEVPEISVRLQEMFGVTRHPTVGGVALKVSLL
SPAQRPIQITRDLPGFWSGSYADVRKDMRAQYPKHPWPEDPTQADPTLRAKPRK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaccagattgcccattgatgacgccctgcccgaattgatcgctgccctgcagcgccag
aaacgcgccgtgttgcaggccccgccgggagcaggcaagaccacgcgggtgcctttggcg
atgctggaggccgggctgtgtgcggggcgcatcctcatgctggagccgcgccgtctggcc
gcccgcgccgccgccgaacgcatggccgatacgctggggcagccggtcgggcagaccgtg
ggctaccggatcaggggtgaggcgaaggtgagcgccgagacgcggatcgaggttgtcacc
gaaggcattctgacccggatgctgcaatcggaccccgacctgcccggcgttggcgcggtg
atttttgatgaattccacgaacggtcgctgaatgccgattttggtctggcgctctgtctg
gaggtggccggcgccctgcgcgacgatctgatcctgctggccatgtccgccacgttggac
gccgccccagtcgccgaattgatggaggcgccactggtaacctccgaagggcgcagctat
ccggttgagacccgctggctggacacccccctgcccgccgacagccgcagcggacgcggt
ccgaggcggctggatgcgctggtcgatctggtactgcgcgccgaagccgaaagccgcccc
gcaggatcgggcggcagaggcgggtccgaggccaagggcggcggcattctggtgttcctc
cccggcgagggcgaaatccgcaaggcggccgccgcactggctggccggttgcccggagat
tgcgtggtgcgcccgctgtttggtgccctcccctttgccgagcagcgcacggcgatccag
ccggaccctgtggcgcgcaaaatcgtgctggcgacatctattgccgaaacctcgctcacc
attcaggacattcgcgtggtggtggacatggggctggcaagacgcagccggttcgacccc
ggttccggcatgtcgcgactggtgacggaacgggtcacccgcgccgaggcgacacaacgg
cagggccgcgccggccgggttgcagctggtgttggttatcggttgtggaccaagggcgag
gatggcgcactggctgcgtttccgccaccggaaattcaagccgccgacctcacatcactg
gcgctggaactggcgctctggggggcgggtccgggtgatctgccgtttctgacgccaccg
ccagagggcgccctcaaggaagcgcaggcgctgctgcggatgctgggcgcactggatggc
gagggacggatcacctcccatggcaaggccctggccaaattgcccctgcacccgcgtctg
gggcatatgctggcgcgctttggcgctgatgcggcaccgctggcggcgctgctggcggaa
cgcgatccgttgcgcggcgcgccggtggatctggcgctgcggctggaggccctgagggac
gcaaaggcgtttcagcgtcgccggagctatcagctgaacatccccacgctggaacgtatc
aagggagaggccaagcggctgacacggcaagcgcgcagtggtgcatcctccgcttcggca
agtgctgccgtgatggccgccgccgcctaccccgaccggatcggccagcgccgcaagggc
gatgcgccgcgctatgtgctgtccggtggcaagggcgcggtgctgccgcctgaggacagt
ctggcggcgacgccgtttctggtggggctcgacagtgatggcaacccgcgtgaggcgcgg
ctgcggctggccgcgcccatcaccctatcggagctgcgcagcgcatttgcagatcagatc
aaaccacagctgacctgtgtctggtccaaacgtgaccgccgggttgtggcgcgtcgccag
cagtgtctgggcgccatcgtgctggaggatcacatctggaaggatgttccggcggacgcc
atcgcaacagcaatgctggagggggtgcgcgaactggggctgcgcctcagcggcgcggct
gcgcggtttgtggcgcgggtacgattgttgcaggcggatggtgaggatctgccggatttc
agcgaagaagctttgctggcgacactggaagattggctgctgccgatgctggacggggtg
cgcagcgccgaggattggaaacgctttgacctgctgcccgcgctgcgcacggcgctcagc
tgggagcagacgcagcggctggaccagatggcgccgccacatttcaccacgccactgggg
cgcaaggtgccgattgattacgcagaggaagtgcctgagatttccgtcaggctgcaggag
atgtttggggtcacccgccatccgaccgtgggtggcgtggcgctgaaggtctccctgctg
tcgccggcgcagcgaccgatccagatcacccgcgacctgcccggtttctggtccgggtca
tatgcggatgtacgcaaggatatgcgggcgcaataccccaaacacccctggcccgaagac
cccacccaggcggatcccaccttgcgggcgaagccacgcaaatag
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