Paenibacillus graminis: PGRAT_25305
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Entry
PGRAT_25305 CDS
T03325
Name
(GenBank) thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PGRAT_25305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgm03016
]
PGRAT_25305
Enzymes [BR:
pgm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
PGRAT_25305
Transfer RNA biogenesis [BR:
pgm03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
PGRAT_25305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ATP_bind_3
Asn_synthase
ThiI
QueC
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
AIQ70581
UniProt:
A0A089M9U7
LinkDB
All DBs
Position
5579207..5580334
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AA seq
375 aa
AA seq
DB search
MSMTKANQDTRVVVGMSGGVDSSVTALLLKQQGYDVIGIFMKNWDDTDEFGVCTAETDAE
DVRRVCEQIDIPYYTVNFEKEYFDKVFSYFLDEYKAGRTPNPDVMCNREIKFGEFLNKAL
QLGADYVATGHYARVIEEDGVFKLLRGVDSNKDQTYFLNALNQYQLSKAMFPIGHLPKPE
VRRIAEEAGLYTAKKKDSTGVCFIGERNFREFLSQYLPAQSGDMVDIATGEVKGRHEGLM
YYTLGQRQGLGIGGSGTGEPWFVAEKDLNRNILYVVQGDKHPSLYSTSLTASGVNWIEEG
QLGAAPLKCTAKFRYRQPDQGVTLTAQEDGMVHVAFDAPQKAITPGQAVVFYLDEQCLGG
GTIEAAEKVVPLPQL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atttcgatgacaaaggcaaatcaggatacacgtgtcgttgtcggcatgtcgggaggagtc
gattcctctgttacggcgctactgcttaagcagcaaggctatgacgtcatcggcatcttc
atgaagaactgggacgataccgacgagttcggcgtgtgcacagccgagaccgacgccgag
gatgtccgccgcgtatgcgagcagattgatattccttactataccgttaatttcgagaag
gaatactttgataaagtcttttcctatttcctcgatgaatataaggccggacggacacct
aatccggatgtcatgtgcaaccgtgagatcaagttcggggaattcctgaataaggcgctg
cagcttggcgcagattatgttgctaccggccactatgcaagggttatcgaagaagacggt
gtcttcaagctgctgcgcggagtggacagcaataaagatcagacctatttcctcaatgcg
ctgaatcagtaccagctctccaaagcgatgttcccgatcggacatctgccgaagcctgaa
gtgcgccggatcgccgaagaagccggactgtatactgccaagaaaaaggacagcaccggc
gtctgcttcatcggcgagcgcaatttccgcgaattcctcagccaatacctgccggcccaa
tccggcgacatggtagatatcgccaccggcgaagtcaaaggacggcatgaaggcctaatg
tattatacactgggtcagcgccagggccttggcatcggcggctccggcaccggtgagcct
tggtttgtggccgaaaaagatctgaaccgcaacattctctatgtggttcaaggcgacaag
catccaagtctgtactccaccagtctgaccgcctcgggcgtgaactggattgaagaaggc
cagcttggggctgccccgctgaaatgcaccgcgaagttccgctaccgccagccggatcag
ggcgtgaccttgactgcgcaggaagacggaatggttcacgtcgccttcgatgccccgcaa
aaggcgattaccccaggtcaggctgtagtattctatctggacgaacaatgcctgggcggc
ggaaccatcgaggctgccgagaaagtcgtcccgctgccgcagctgtaa
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