Pseudobacter ginsenosidimutans: FSB84_16120
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Entry
FSB84_16120 CDS
T06126
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FSB84_16120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgo03400
]
FSB84_16120
DNA repair and recombination proteins [BR:
pgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FSB84_16120
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_29
AAA_16
AAA_27
APS_kinase
AAA_14
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QEC43145
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Position
4017683..4018972
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AA seq
429 aa
AA seq
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MKFLQTDDQTIGDLRLFSKKEQRGIYDIYNNTATRGGELLLEKMFRNPLSDQDAIMERAG
IIASLAKLNAAFSFGSGLLDSVEKYLSHHENKDGQKATMGEKEISNGATAIIELLHAVRH
YLEQGDIAKVEGLTRERIAMTKLLNDPALEPVFREKSQPKLSYAAVTAFDILFRVKEKNR
MLAVMDFIYQMDVFISVAAVSVKRDFVFPVAKPKGSSVVKMEGVYHPELSHPVANSLYMD
GSRSVVFLTGANMAGKSTFLRSFSTALYIAHMGFPVAAKLVEFSVMDGIYTTINLPDNLG
IGASHFYAEVLRVKQVAAELGAGKSLFVLFDELFRGTNVKDAHEGTVAITHAFAGKKTSL
FIISSHIVEAGDELKQKKNIAFHYLPTKMSGTVPDYTYTLEEGITDDRHGMIIIRNEGIL
ETLKNGKKE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttgcaaacggatgatcaaaccatcggagatctcaggctcttttccaaaaag
gaacagagaggcatatacgatatctataacaacacagccaccaggggaggagaattgctg
ctggagaaaatgttcaggaatccgttgtctgaccaggatgccattatggagcgagccggg
atcatcgcatccctggcgaagctgaatgcggcattctctttcggatcaggattgctggac
agtgttgagaaatatttgtcgcaccatgaaaacaaagatgggcaaaaagcgacgatggga
gagaaagagatcagcaatggggcaacagctatcattgagttgctgcatgctgtacgccat
tatcttgaacagggagatatagcaaaagtggaaggattaacaagggaaaggatagccatg
acaaaactcctgaatgatcccgcacttgaacctgtattcagggaaaagtcccagccgaaa
ttatcttatgctgcggtgactgctttcgatatcctgttcagggtaaaggagaagaacagg
atgctggctgtgatggatttcatttaccagatggatgtattcatttccgtggcagcagtt
tctgtaaaaagggattttgtttttccggtagcgaaaccgaaggggagctctgtggtgaaa
atggaaggagtgtaccatcccgagctgagccatcctgtagcgaattccctgtatatggat
gggagcaggtctgtagtattcctgaccggcgccaatatggctggaaagtccacattcctc
aggagtttcagtacggcgctgtacatcgcgcatatgggattcccggtagccgcgaagctt
gttgaattttcggttatggatggtatttacactactatcaacctgcctgataacctgggt
atcggcgccagtcatttctatgcagaagtgctgcgggtgaagcaggtggcggcagagctt
ggcgccgggaaatcgctttttgttttgttcgatgaattgttccggggaacgaatgtgaaa
gatgctcatgaaggtactgtggccattacgcatgcatttgcaggtaagaagaccagcctt
ttcatcatctcctcccatattgtggaggccggcgatgagctgaagcaaaagaagaatatc
gctttccattatttgcctacgaagatgagtggaacagtccctgactatacctatacgtta
gaagaaggcattacggatgacaggcatggtatgatcattatccgtaacgagggaattctt
gaaacattgaaaaacggaaagaaagaataa
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