Paraburkholderia graminis: CUJ91_02000
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Entry
CUJ91_02000 CDS
T05548
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pgp
Paraburkholderia graminis
Pathway
pgp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUJ91_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgp03400
]
CUJ91_02000
DNA repair and recombination proteins [BR:
pgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUJ91_02000
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CUJ91_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_23
nSTAND1
BCA_ABC_TP_C
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_21
AAA_22
AAA_25
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AXF06807
LinkDB
All DBs
Position
PHS1_A:complement(441600..444473)
Genome browser
AA seq
957 aa
AA seq
DB search
MEQIRIRGARTHNLKNVNLDLPRHKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGTPYC
PDHEIPLEAQSVSQMVDAALALPDETKLMILAPVVADRKGEHVELFEEMQAQGFIRFRVR
SGGGTANEGAAKIYDVDSLPKLKKNDKHTIDVVVDRLKVRPDMKQRLAESFETALRLADG
RAIALEMDTDKQHLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYDFDIDTAVEDLPEKVRKILLFGSG
KQEIPFSYINERGRASVREHVFEGIIPNLERRYRETDSAAVREELAKYQNNQPCPACAGT
RLRREARFVRIGADGDARGIYEISGWPLRDALGYFQTLRLEGSKREIADKVIKEIVARLM
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
STLKHLRDLGNSVIVVEHDEDMIRMADYVVDMGPGAGEHGGMVIAEGTPKQVQANAASMT
GQYMSGARTIEYPDERKDPDERHLRIVEAHGNNLRHVTLDLPVGLLTCVTGVSGSGKSTL
INDTLYQAVAHHLYGSSTEPAPYESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKR
YNRETLDVQYKGKNISEVLDMTVEHAYEFFRPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDMGPEGGAGGGQIIAQGTPEQIAKSKASFTGRYLAPLLKRAASKK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaaatccgtattcgtggggctcgcacccacaacctgaagaacgtcaatctcgac
ctaccacgtcacaagctcgtcgttattaccggtctttccggctcggggaaatcgtcgctc
gcgttcgacacgctctacgcggaaggacagcggcgctacgtcgaaagcctgtcggcctac
gcgcgtcaattcctgcaattgatggaaaagcccgatgtcgatctgatcgagggcctgtcg
ccggccatctcgatcgagcagaaggccacctcgcataacccgcgttcgacggtcggcacc
gtcaccgagattcacgactacctgcggctattgttcgcacgcgtcggcacgccctattgc
ccggaccacgaaatcccgctcgaggcgcaaagcgtgtcgcaaatggtcgacgcggcgctc
gcgttgcccgacgaaacgaagctgatgatcctcgcgccggtcgtggccgaccgcaagggc
gagcacgtcgaactgttcgaggaaatgcaggcgcagggcttcatccgtttccgtgtgcgc
tcgggcggcggcacggccaacgaaggcgccgcgaagatctacgacgtcgactcgctgccg
aagctgaagaagaacgacaagcacaccatcgacgtggtcgtggaccgcctgaaggtgcgt
cccgacatgaagcagcgtctcgcggaatcgttcgaaaccgcgctgcgtctcgccgacggc
cgcgcgatcgcgctcgaaatggacacggacaagcagcatctgttcagttccaagttcgcg
tgcccgatctgctcgtattcgcttcaggaactggagccgcggctcttctcgttcaacaat
ccgatgggcgcgtgccccgaatgcgacggcctcggccagattactttcttcgatccgaag
cgggtggtcgcgcatccgtcgctgtcgcttgcggctggcgcggtgaagggctgggaccgg
cgcaaccagttctacttccagatgctgcaaagcctcgcggcgttctacgatttcgacatc
gacactgccgtcgaagacctgccggaaaaggtccgcaagatcctgctgttcggctcgggc
aagcaggaaattccgttctcgtacatcaacgagcgcgggcgcgcgtcggtccgcgagcat
gtgttcgaaggcatcattccgaatctggagcggcgttaccgcgaaacggattcggccgcg
gtgcgcgaggaactcgccaagtaccagaacaatcagccctgccccgcgtgcgcgggcacg
cggctgcgccgcgaagcgcgcttcgtgcggatcggcgcggacggcgacgcgcgcggcatc
tacgaaatcagcggttggccgttgcgcgatgcgctcggctacttccagacgctgcgcctc
gaaggctcgaagcgcgagatcgccgacaaggtcatcaaggaaatcgtcgcgcggctcatg
ttcctgaacaacgtcgggctcgattatctgtcgctcgaacgcagcgccgaaacgctgtcg
ggcggcgaggcgcagcgcattcgcctcgcgtcgcagatcggctccggcctcaccggcgtg
atgtacgtgctcgacgagccgtccatcggactgcatcagcgcgacaacgaccggctgatc
tccacgctcaagcatctgcgcgatctgggcaactcggtgatcgtggtcgagcacgacgaa
gacatgatccgcatggccgactacgtggtcgacatgggtccgggcgcgggcgagcatggc
ggcatggtgatcgccgagggcacgccgaagcaggtgcaggccaatgcggcttcgatgacg
gggcagtacatgtccggcgcgcgcaccatcgagtatccggacgagcgcaaggacccggac
gagcggcatctgcgcatcgtcgaggcgcacggcaacaatctgcggcacgtcacgctcgat
ctgccggtcgggctgctgacgtgcgtgaccggcgtgtcgggctcgggcaagtcgacgctc
atcaacgacacgctgtatcaggcggtcgcgcatcacctttatgggtcgtccacggagcct
gcgccgtacgagtcgatcgagggactggagcatttcgacaaggtgatcaacgtcgaccag
tcgccgatcggccgcacgccgcgctccaatccggccacttacacgggcctcttcacgccg
atccgcgaactgttcgcgggcgtccccgccgccaaggagcgcggctacgacccggggcgt
ttctcgttcaacgtgaagggcggccgctgcgagtcctgtcagggcgatggcgtgctgaag
gtcgaaatgcactttctgccggacgtgtacgtgccttgcgacgtctgccacggcaagcgc
tacaaccgcgaaacgctcgacgtgcagtacaaaggcaagaacatcagcgaagtgctcgac
atgaccgtcgagcacgcgtacgagttcttcaggccggtgccggtcgtcgcgcgcaagctg
aaaaccttgctcgacgtgggcctcggctatatccggctggggcagtccgcgaccacgctg
tcgggcggcgaggcgcagcgcgtcaaactatccctggaactgagcaagcgtgataccggt
cgcacgctatacattctcgacgaacccacgaccgggttgcactttcatgacattgcgctg
ctgctggaagttattcatcggttacgcgaccagggtaataccgtcgtgatcatcgagcat
aatctcgatgtaatcaaaactgccgactgggtcatcgacatgggtccggaaggcggcgcg
ggcggcggccagatcatcgcgcaaggcacgcccgagcagatcgcgaagtccaaagcaagt
tttaccggtagatacctggcgcctttgctgaaacgcgcggccagtaaaaagtaa
DBGET
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