KEGG   Paraburkholderia graminis: CUJ91_02000
Entry
CUJ91_02000       CDS       T05548                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
pgp  Paraburkholderia graminis
Pathway
pgp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pgp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CUJ91_02000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgp03400]
    CUJ91_02000
DNA repair and recombination proteins [BR:pgp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CUJ91_02000
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CUJ91_02000
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 AAA_23 nSTAND1 BCA_ABC_TP_C DnaJ_CXXCXGXG RsgA_GTPase nSTAND3 AAA_21 AAA_22 AAA_25 Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: AXF06807
LinkDB
Position
PHS1_A:complement(441600..444473)
AA seq 957 aa
MEQIRIRGARTHNLKNVNLDLPRHKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGTPYC
PDHEIPLEAQSVSQMVDAALALPDETKLMILAPVVADRKGEHVELFEEMQAQGFIRFRVR
SGGGTANEGAAKIYDVDSLPKLKKNDKHTIDVVVDRLKVRPDMKQRLAESFETALRLADG
RAIALEMDTDKQHLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYDFDIDTAVEDLPEKVRKILLFGSG
KQEIPFSYINERGRASVREHVFEGIIPNLERRYRETDSAAVREELAKYQNNQPCPACAGT
RLRREARFVRIGADGDARGIYEISGWPLRDALGYFQTLRLEGSKREIADKVIKEIVARLM
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
STLKHLRDLGNSVIVVEHDEDMIRMADYVVDMGPGAGEHGGMVIAEGTPKQVQANAASMT
GQYMSGARTIEYPDERKDPDERHLRIVEAHGNNLRHVTLDLPVGLLTCVTGVSGSGKSTL
INDTLYQAVAHHLYGSSTEPAPYESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKR
YNRETLDVQYKGKNISEVLDMTVEHAYEFFRPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDMGPEGGAGGGQIIAQGTPEQIAKSKASFTGRYLAPLLKRAASKK
NT seq 2874 nt   +upstreamnt  +downstreamnt
gtggaacaaatccgtattcgtggggctcgcacccacaacctgaagaacgtcaatctcgac
ctaccacgtcacaagctcgtcgttattaccggtctttccggctcggggaaatcgtcgctc
gcgttcgacacgctctacgcggaaggacagcggcgctacgtcgaaagcctgtcggcctac
gcgcgtcaattcctgcaattgatggaaaagcccgatgtcgatctgatcgagggcctgtcg
ccggccatctcgatcgagcagaaggccacctcgcataacccgcgttcgacggtcggcacc
gtcaccgagattcacgactacctgcggctattgttcgcacgcgtcggcacgccctattgc
ccggaccacgaaatcccgctcgaggcgcaaagcgtgtcgcaaatggtcgacgcggcgctc
gcgttgcccgacgaaacgaagctgatgatcctcgcgccggtcgtggccgaccgcaagggc
gagcacgtcgaactgttcgaggaaatgcaggcgcagggcttcatccgtttccgtgtgcgc
tcgggcggcggcacggccaacgaaggcgccgcgaagatctacgacgtcgactcgctgccg
aagctgaagaagaacgacaagcacaccatcgacgtggtcgtggaccgcctgaaggtgcgt
cccgacatgaagcagcgtctcgcggaatcgttcgaaaccgcgctgcgtctcgccgacggc
cgcgcgatcgcgctcgaaatggacacggacaagcagcatctgttcagttccaagttcgcg
tgcccgatctgctcgtattcgcttcaggaactggagccgcggctcttctcgttcaacaat
ccgatgggcgcgtgccccgaatgcgacggcctcggccagattactttcttcgatccgaag
cgggtggtcgcgcatccgtcgctgtcgcttgcggctggcgcggtgaagggctgggaccgg
cgcaaccagttctacttccagatgctgcaaagcctcgcggcgttctacgatttcgacatc
gacactgccgtcgaagacctgccggaaaaggtccgcaagatcctgctgttcggctcgggc
aagcaggaaattccgttctcgtacatcaacgagcgcgggcgcgcgtcggtccgcgagcat
gtgttcgaaggcatcattccgaatctggagcggcgttaccgcgaaacggattcggccgcg
gtgcgcgaggaactcgccaagtaccagaacaatcagccctgccccgcgtgcgcgggcacg
cggctgcgccgcgaagcgcgcttcgtgcggatcggcgcggacggcgacgcgcgcggcatc
tacgaaatcagcggttggccgttgcgcgatgcgctcggctacttccagacgctgcgcctc
gaaggctcgaagcgcgagatcgccgacaaggtcatcaaggaaatcgtcgcgcggctcatg
ttcctgaacaacgtcgggctcgattatctgtcgctcgaacgcagcgccgaaacgctgtcg
ggcggcgaggcgcagcgcattcgcctcgcgtcgcagatcggctccggcctcaccggcgtg
atgtacgtgctcgacgagccgtccatcggactgcatcagcgcgacaacgaccggctgatc
tccacgctcaagcatctgcgcgatctgggcaactcggtgatcgtggtcgagcacgacgaa
gacatgatccgcatggccgactacgtggtcgacatgggtccgggcgcgggcgagcatggc
ggcatggtgatcgccgagggcacgccgaagcaggtgcaggccaatgcggcttcgatgacg
gggcagtacatgtccggcgcgcgcaccatcgagtatccggacgagcgcaaggacccggac
gagcggcatctgcgcatcgtcgaggcgcacggcaacaatctgcggcacgtcacgctcgat
ctgccggtcgggctgctgacgtgcgtgaccggcgtgtcgggctcgggcaagtcgacgctc
atcaacgacacgctgtatcaggcggtcgcgcatcacctttatgggtcgtccacggagcct
gcgccgtacgagtcgatcgagggactggagcatttcgacaaggtgatcaacgtcgaccag
tcgccgatcggccgcacgccgcgctccaatccggccacttacacgggcctcttcacgccg
atccgcgaactgttcgcgggcgtccccgccgccaaggagcgcggctacgacccggggcgt
ttctcgttcaacgtgaagggcggccgctgcgagtcctgtcagggcgatggcgtgctgaag
gtcgaaatgcactttctgccggacgtgtacgtgccttgcgacgtctgccacggcaagcgc
tacaaccgcgaaacgctcgacgtgcagtacaaaggcaagaacatcagcgaagtgctcgac
atgaccgtcgagcacgcgtacgagttcttcaggccggtgccggtcgtcgcgcgcaagctg
aaaaccttgctcgacgtgggcctcggctatatccggctggggcagtccgcgaccacgctg
tcgggcggcgaggcgcagcgcgtcaaactatccctggaactgagcaagcgtgataccggt
cgcacgctatacattctcgacgaacccacgaccgggttgcactttcatgacattgcgctg
ctgctggaagttattcatcggttacgcgaccagggtaataccgtcgtgatcatcgagcat
aatctcgatgtaatcaaaactgccgactgggtcatcgacatgggtccggaaggcggcgcg
ggcggcggccagatcatcgcgcaaggcacgcccgagcagatcgcgaagtccaaagcaagt
tttaccggtagatacctggcgcctttgctgaaacgcgcggccagtaaaaagtaa

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