Paraburkholderia graminis: CUJ91_13770
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Entry
CUJ91_13770 CDS
T05548
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp03030
DNA replication
pgp03430
Mismatch repair
pgp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUJ91_13770
03430 Mismatch repair
CUJ91_13770
03440 Homologous recombination
CUJ91_13770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgp03032
]
CUJ91_13770
03400 DNA repair and recombination proteins [BR:
pgp03400
]
CUJ91_13770
Enzymes [BR:
pgp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUJ91_13770
DNA replication proteins [BR:
pgp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CUJ91_13770
DNA repair and recombination proteins [BR:
pgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CUJ91_13770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
ATP-synt_DE_N
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AXF08858
LinkDB
All DBs
Position
PHS1_A:complement(3106840..3107994)
Genome browser
AA seq
384 aa
AA seq
DB search
MSEQFLAEPAFAEPIVFVDLETTGGSTSEHRITEVGVVEVGPAGVTRWSSLVDPQQPIPS
FIQQLTGITNAMVRGAPTFDAIAPELFARLNGKLFVAHNASFDRGFLRGEFRRAGISFDP
DVLCTVRLSRALFPSEKRHGLDALVERHSLVPSDRHRALADADLIWQFWQRLHGLVPLDV
LRAHIERTTRRYRLAGNITEDLLDTAPAGCGVYAFYGDDDLPLYVGRSVRVRQRLRAHLT
GERRSSKDIRLAQQVRRVEWRATGGELGAMLTEAQWIAALRPGHNRAPRVAKSDPIDAPW
PFVGPVVFEEREQASEACAFHVVDRWCYIGHAPSLEQATELHTSRLDSSGFELSTYRILQ
SHLARGLRMTPLTVVNAEPVVGVA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacagtttttggccgaaccggccttcgcagagcccatcgtctttgtcgatctt
gaaaccaccggcggctcgaccagcgagcaccgcattaccgaggtcggcgtcgtcgaagtc
gggccggccggcgtcacgcgctggagcagcctcgtcgatccgcagcaaccgattccgtcc
ttcattcagcagctgaccggcatcacgaatgcgatggtgcgcggcgcgccgacattcgac
gccatcgcgcccgaactctttgcccgcctgaacggcaaactgttcgtcgcgcataacgcg
agcttcgaccggggtttcttgcgtggcgaattccggcgcgccggtatttcattcgacccg
gacgtgctgtgcaccgtgcgcctgtctcgcgcgctgtttccgtcggaaaagcgtcacgga
ctcgatgcgctggtcgagcgtcattcgctcgtgccgtcggatcgccaccgcgcgctcgcc
gacgccgatctgatctggcagttctggcagcgcctgcatggcctcgtgccgctcgacgtt
ttaagggcgcacatcgagcgcacgacccggcgctaccggctggccggcaacatcactgaa
gatctgctcgacacggcgcctgcgggctgcggcgtctacgcgttctatggagacgacgac
ttgccgctgtatgtcggacgaagcgttcgcgtccgtcagcggcttcgcgcgcatctgaca
ggggagcgccgttcgtcgaaggatatacggcttgcgcagcaggttcggcgtgtcgaatgg
cgcgcgacgggcggcgagctgggcgcaatgctgacagaggcacagtggattgcggcgctg
cggccggggcacaatcgcgcgccgcgcgtcgccaagagcgatcccatcgacgcgccgtgg
ccgtttgtcgggcctgtcgttttcgaggagcgggaacaagcgtcagaggcgtgcgctttt
catgttgttgaccgctggtgttatatcggccatgcgccgtcgctggagcaggcgaccgag
ttgcacacgtcgcgtctggatagcagcggctttgagctttcgacgtatcggattttgcaa
agccatctcgcacgcggtttgcggatgacgccgctgacggtcgtgaacgcggagcctgtc
gtgggcgttgcctga
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