Paraburkholderia graminis: CUJ91_22725
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Entry
CUJ91_22725 CDS
T05548
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pgp
Paraburkholderia graminis
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgp03032
]
CUJ91_22725
03400 DNA repair and recombination proteins [BR:
pgp03400
]
CUJ91_22725
Enzymes [BR:
pgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CUJ91_22725
DNA replication proteins [BR:
pgp03032
]
Prokaryotic type
DNA Topoisomerases
CUJ91_22725
DNA repair and recombination proteins [BR:
pgp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CUJ91_22725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AXF10758
LinkDB
All DBs
Position
PHS1_B:complement(1012777..1014147)
Genome browser
AA seq
456 aa
AA seq
DB search
MAMTNSTTQNGHASTDDSAKQAAPAAMPPGLRHADDSKPGYTRKREKEGFAYFDVEGKRI
EDEAEIQRINSLAIPPAYEDVWICPDPRGHIQATGRDVRGRKQYRYHPRWRETRDADKYE
RMAEFGRALPRIRARVARDLELPGMPADKVFAAVVRLLDTTLVRVGSVEYARENQSYGLT
TLRKKHVKVEAGQLRFRFRGKSGIEHDVTVDDPRVKRIVRRCAELPGHDLFQYLDEDGTR
RTVGSADINDYLRRASGADFTAKDYRTWAGSVYALATLRRLVCDSATEARRHIVATVKEV
AGLLRNTPAVCRRCYIHPAVISAFEADELQTLPPGQSRRGLKVDEVAFAALLAHAEKRAA
KLARQAGAKGRKLREAQAADSINGSISTLLQKSRVIRKEANKAAAKAGAKTGRAARAKVN
EEVTGKASRKAGARSARRAAGERVGSPQSTDKPAAS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctatgacgaacagcacaactcaaaacggtcatgcatcgaccgacgacagcgcgaag
caggccgcgcccgccgcgatgccgcccggtctgcgccacgccgacgacagcaagcctggc
tacacgcgcaagcgcgagaaagaaggcttcgcgtatttcgacgtcgaaggaaaacgcatt
gaagacgaagcggaaatccagcgcatcaactcgctcgcgattccgcccgcctatgaggac
gtatggatttgccccgatccgcgcggccacattcaggcgaccggacgcgacgtgcgcggc
cgcaagcaataccgttatcacccgcgctggcgcgaaacgcgcgacgcggacaagtacgaa
cgcatggcggaattcggccgcgcgttgccgaggattcgcgcccgcgtcgcgcgcgatctc
gaactgccgggcatgcctgccgacaaggtgttcgcggccgtcgtgcggctgctcgatacg
acgcttgtgcgcgtcggcagcgtcgaatatgcgcgcgaaaatcagtcatacggtttgacg
acgctgcgcaagaaacatgtgaaagtcgaagcgggacagttgcgtttcaggtttcgcggc
aagagcggcatcgagcacgacgtcacggtcgacgacccgcgcgtgaagcgcatcgtgcgg
cgctgtgccgaactgccggggcacgacctgttccagtatctcgacgaggacggcacgcgc
cgcaccgtcggctctgccgacatcaacgactatctgcgccgtgcaagcggcgccgacttc
accgcgaaagattatcggacatgggccggcagcgtgtatgcgctcgcaacgctgcggcgg
ctcgtgtgcgatagcgccacggaagcgcgtcgccatatcgtcgcgaccgtgaaggaagtc
gcgggcctgctgcgcaatacgcccgccgtctgccggcgctgctatatccatccggccgtc
atcagcgccttcgaagccgacgaattgcagaccttaccgccgggccagtcgaggcgcggt
ctgaaagtggacgaagtggcgtttgccgcgttgctcgcacatgcggaaaaacgcgcggcg
aaactcgcgcgtcaggcgggcgcgaagggccgcaagctgcgcgaagcacaagccgccgac
agcatcaacggctcgatttcgacactgcttcagaagtcgcgtgtgattcgcaaggaagcg
aacaaggcagcagcgaaagccggcgcaaaaaccggccgggctgcccgcgctaaggtcaac
gaggaagtcacgggaaaggccagccggaaagccggcgcgcgaagcgcgcggcgagccgcg
ggggagcgcgtcggctcgccgcagtccacggacaaaccggctgcgagttga
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