Planococcus glaciei: FK545_16175
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Entry
FK545_16175 CDS
T06125
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pgq
Planococcus glaciei
Pathway
pgq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FK545_16175 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgq03400
]
FK545_16175 (xseB)
Enzymes [BR:
pgq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FK545_16175 (xseB)
DNA repair and recombination proteins [BR:
pgq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FK545_16175 (xseB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF1657
DUF4200
PipB2_N
HIRA_B
HTH_7
DUF5667
Motif
Other DBs
NCBI-ProteinID:
QDY46333
LinkDB
All DBs
Position
3189903..3190139
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AA seq
78 aa
AA seq
DB search
MAEKEIMFNQAMEQLEEIVRQLEQGDVPLEEALTLYQKGMELSKVCHDKLQNAEKQLVTM
MKDGKEVSVDIETEGNAK
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaagaaatcatgtttaaccaggcgatggaacaactggaagaaatcgtgcgt
caattagagcaaggcgatgtgccgctcgaagaagcgctgactttataccaaaaaggaatg
gaactttcgaaagtctgccacgacaagctgcaaaatgcggaaaaacagcttgtgaccatg
atgaaagacggcaaagaagtgtcagtggacatagaaacggaaggtaatgcgaaatga
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