Puccinia graminis: PGTG_20838
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Entry
PGTG_20838 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
pgr
Puccinia graminis
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgr03036
]
PGTG_20838
Enzymes [BR:
pgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
PGTG_20838
Chromosome and associated proteins [BR:
pgr03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
PGTG_20838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
Motif
Other DBs
NCBI-GeneID:
13543205
NCBI-ProteinID:
XP_003890550
UniProt:
H6QPF7
LinkDB
All DBs
AA seq
1158 aa
AA seq
DB search
MAPRKANKNVEKKLTETVLLPNDERMLEGSPIPWSHLFELARFYQSFSAEEQAKIKLSSW
VEAAKKVANPAELPEQLFAGSKRSGKIDRLARIAGPLKELFKRAQPKKTPEEEEEHTLAD
IQKLIGCSINLDLSKRTDNSPLAFIPRLNPPAFCKPNQLNRSYGAHRFIHLKLSDQLSSR
LRPRASNRTALQKSFREFIHAPIRIGNRLFYFFLRKENCLWFVASEEPGWESTKVFINEL
LDLKINKDMTVAKWAARTSLLLSATQSSIDIDPEDIRRVPDLYSDSLVISKDLLSSVADT
LGLSYLPSCIEGSIRNQAFVWRLGPPSKDEKIQLWEDQLGKASKHVFIKFRARPYEFHQK
RFVLQEESFTILLDQCLSMGPRPPGKSEIMTDGAGIISRAAATRVCESLGRKYDTLPSAY
QARIGFSKGLWVVPPEYSAHNITPWIEIRDSQWKAEPIEGYTFHFNLCRISRSVTSSSLG
KQLLPVLSARGVQNKTVCSALEEHITSTISDLNSADPLRLAEVLSRSGGLKQTRRAILDR
ISNVQHNPTAYRTYGNDPVAPNIDPEYGESWAFTTDGLHAMSLVPFHAEEQVISMLAAGF
EPRNRYIVTKLRKIKEDKISNAIKFRVPIAQSTYLYVMPDPTGTLKEDEAFLQFSSFEDY
QTGIKLSNLVCPAIVSRSPCVASIDARKINLVDNDILRDVYYDVLVCSIQGKTSLLSLLS
GGDYDGDQVMVIWDPVLVQQFHNVDLDKHPRIVTDELFEPVQLGTVEECLLEAYENNPEE
FVKTAQLIQAAGLFTPNDAGSYSIKHTMAEYLFGLDNPLTQKLGEVYVKCLDAPKAGTQL
KAEADLLLKKEYETALDKVTFPNGKKIIHFPVKSYPIPKYLSGDPKFSFNGAARAIRFEF
SGKPHILDEILKMGYALLKTYKEELDSKDIVTHQERFHDRDEDLSQFFLERKRFYEFNRS
EPGACEIWIGILRPLQRAIRNIAGEWGKAIAEGANAHVRDKIWESEYGPGTGGSGKNSKH
AYDVQKKYDELSYSKAFEYQPGPEEMELYKFDLDEFKLTIDLYLQGLGPTGYALLKASCL
AMCCNPESFCPYDIAFREICHLKTLARQKKTHLTSTGETDMIDIRAPKSIVTTSYLTNVV
KQGTLLGRSKPQAHSDPV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcgtaaagcgaacaagaatgttgaaaaaaaattgactgaaacagtactctta
ccgaatgatgagcggatgctggaaggatcgccgattccgtggagccatctgtttgagcta
gcacgcttctaccaatcattcagtgcggaggagcaggcgaagatcaagctatcgagttgg
gtggaggcggcgaagaaggtggccaacccggccgagcttccggagcaactgttcgcaggc
tcgaagaggagtgggaagatcgaccgactggccaggatcgccgggccattgaaggaactc
ttcaagcgagcccagccgaagaagacgccggaggaggaggaggagcacaccctagcagac
atccagaagctcatcggctgctcaatcaacttggatctctccaagcgaaccgataacagt
cctctggccttcatccccagactcaaccctccagccttctgcaaaccgaaccaactcaat
cggtcctatggcgcacatcgcttcatccatctcaaactctccgatcaactcagctctcgc
ctcagacctcgcgcttccaatcgaaccgccctccagaaatcattcagggagttcatccat
gcgcccatcagaatcggaaataggctgttctacttctttctcaggaaggagaattgtctg
tggttcgtcgcctcagaagaaccaggttgggaatcgaccaaggttttcatcaacgagctc
ttagatctcaagatcaataaggacatgacggtggccaaatgggcggcacgcacctctctc
cttctatctgctacccaatcatccattgatatcgaccctgaagatatcaggagggttccg
gacttgtattctgatagcttggtgatctcaaaagacttgctcagctcggttgctgacacg
cttggcttaagctatcttccatcttgtatcgaaggctcgatcagaaaccaagcgtttgtg
tggagacttggtccacccagcaaggacgagaagatccaactgtgggaggaccagctcggc
aaggcctccaaacatgtgttcatcaagttcagagcccggccctacgagttccaccaaaag
aggtttgtcctccaagaggaatctttcaccatcttgcttgatcagtgcttgtccatgggc
cctcgcccgcctgggaagtctgaaatcatgaccgatggcgctggaatcatcagtcgggct
gccgctacccgggtttgtgagtcactgggaagaaagtatgatactttgccgtctgcatat
caggctcgaataggtttttctaaaggtctttgggtagtcccgccagaatattctgcgcac
aatattactccctggatcgaaatccgagacagtcaatggaaagctgagcctattgaaggc
tatacgttccatttcaacctatgtcgaatcagtcgttcagttaccagcagctcattagga
aagcaattactaccagttctatccgctcgtggggtgcaaaacaagacggtctgttcagcc
ttagaggaacacatcacctcgacgatcagcgatctgaactcggccgacccgctcagattg
gcagaggtgctgagccgctccggaggactcaaacaaaccagaagggccatcctcgaccgg
atctcgaacgtccaacacaatccgactgcctacagaacctatggaaacgaccccgttgcc
ccgaatatcgatccggaatatggcgaaagttgggcgttcactaccgatgggcttcatgct
atgtcgcttgttcccttccatgctgaggaacaagtcatcagtatgttggccgctggtttc
gaacctagaaatcgttacatcgtcactaagctgcggaaaattaaggaggataaaattagc
aatgcgatcaaattcagagtgccaattgcacaaagtacctacctgtatgtgatgccagac
ccgaccgggacattaaaagaggatgaagcgtttcttcaattctcttcctttgaagattat
cagaccgggatcaagctctcaaacctagtttgtccggccatagtttcgcgatctccttgt
gtagcctcaattgatgcccggaagatcaacttagtggacaatgacatactgagggatgtt
tactatgacgttctggtttgttctatccaagggaaaacatctctcctgagtttgttgtct
ggtggtgattatgatggtgatcaggtcatggtgatctgggatccggtgcttgtccagcag
ttccacaatgtggacttggataaacatcctcggatagttactgatgagctctttgaacct
gttcagcttggaacggttgaggaatgtcttctggaagcttatgaaaataatcctgaagag
tttgtcaagacggctcaattgatccaagctgctggtttattcacaccaaatgatgctggt
tcttactccatcaaacacaccatggccgaataccttttcggccttgataatccattaacc
caaaagttgggtgaggtttatgtgaagtgtcttgatgcacccaaagcaggaacccaactg
aaagctgaggcagatcttctcctcaagaaagagtatgaaactgcattggacaaggtgact
ttcccaaacggaaagaaaatcatccactttccagtcaagagctatccaatccctaagtat
ctttctggggatcctaaattttctttcaatggcgcagcaagagccattcgatttgaattt
agtggaaaaccacacatccttgatgagatattgaagatgggatatgctctcttgaaaacc
tataaggaagagctggattctaaagatattgtaactcatcaggaacgtttccatgatcga
gatgaagatctgtctcaattctttttggagaggaaacggttctatgaattcaacaggagt
gaaccaggtgcttgtgagatttggattggtattctccgtccattacaaagagcaatcagg
aacattgctggtgaatggggaaaggcaattgctgaaggtgcaaacgcacatgtccgggat
aagatttgggaatctgagtatggacctggaactggaggctctggtaaaaacagcaaacat
gcttatgatgtccaaaagaaatatgatgaattgagttacagtaaagcgtttgagtatcaa
ccagggccagaagagatggagctttacaagtttgatctggacgaattcaagttgacaatc
gacctttatttacaaggcttgggtccaactggttatgcacttctcaaagcttcttgttta
gcaatgtgctgcaatcctgagtcattttgtccctatgatattgcttttagagagatttgt
catttgaaaactctagcaagacagaaaaagacacacttgacctctacaggggaaacagac
atgattgatatccgagccccaaaatcgattgttacaacttcatatctcacaaatgttgta
aaacaaggcactcttttgggccgctccaagcctcaagcccattcagatccagtctaa
DBGET
integrated database retrieval system
