Pedobacter ginsengisoli: CPT03_00370
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Entry
CPT03_00370 CDS
T05145
Name
(GenBank) hypothetical protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00540
Lipopolysaccharide biosynthesis
pgs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CPT03_00370
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgs01005
]
CPT03_00370
Lipopolysaccharide biosynthesis proteins [BR:
pgs01005
]
Lipid A
CPT03_00370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
ATP55027
UniProt:
A0A2D1U098
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All DBs
Position
complement(89153..90106)
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AA seq
317 aa
AA seq
DB search
MNSRSILLFSILFILTFSASAQTFKNEFGFKSDNDSYLAQGSDRYYTNGLFIDYRRAMDQ
SKLKNGLEKKIYEISAGQKMYNPISGYSPDPAKQDRPFAGYLYVGGALSWFHSNESILKT
SIELGTTGPNSLAEDGQELLHNTVGFYELDGWQYQIKNELAVNLSTQYTRLLHRASNNAI
DFSFDGYANIGTTFSGAGAGILFRAGGINQLFNSAYTNSVIGNNPKTKALIKREIFFYAK
PQLNFVAYDATVQGSMFNNNSPVTFGVKPIVFAQQIGFNYSSQRFTFDFGMLFKTKEIKS
TAKAHQYGSISMFYRFN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagatctattctcttattttcaattttatttatactaacatttagcgcttcg
gcccaaacttttaaaaatgagttcggttttaaaagcgacaacgactcttatcttgctcaa
ggttctgatcgttattataccaatggtttatttattgattatcgcagagcaatggaccaa
agcaagctaaaaaatggactggaaaagaaaatctatgagatatcggccggacaaaaaatg
tacaatcctatttctggctattcacctgatcccgcaaaacaagacagaccatttgccgga
tacttgtatgttggcggtgcattaagctggtttcatagtaatgaaagtatattaaaaact
agtatagaactaggaacaaccggaccaaattctttagcagaagatggacaagaattatta
cacaatactgttggattttatgagcttgacggttggcaatatcaaattaagaatgaactg
gctgtaaatctttcaacccaatacaccagactgttacatagggcatcaaataatgctata
gatttttcatttgatggttatgcaaatattggtactacatttagcggtgcaggagcgggt
attttattcagagccggcggtattaatcagctattcaactctgcttatacaaattcagtg
attgggaataatccaaaaacaaaagcactgataaaaagagagattttcttttacgccaaa
ccgcaattgaattttgttgcttatgatgctaccgtacaaggaagtatgttcaataataat
agtcccgttacttttggcgtaaaacctattgtttttgcgcaacagattggctttaactac
agttcacaacgcttcacctttgatttcggcatgttatttaaaacaaaagagataaaaagt
actgctaaagcacaccaatacggatcaataagtatgttttacaggtttaattag
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