Pedobacter ginsengisoli: CPT03_13000 Help Entry CPT03_13000       CDS       T05145                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pgs  Pedobacter ginsengisoli Pathway pgs03030   DNA replication pgs03410   Base excision repair pgs03420   Nucleotide excision repair pgs03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pgs00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CPT03_13000    03410 Base excision repair     CPT03_13000    03420 Nucleotide excision repair     CPT03_13000    03430 Mismatch repair     CPT03_13000  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pgs03032]     CPT03_13000    03400 DNA repair and recombination proteins [BR:pgs03400]     CPT03_13000 Enzymes [BR:pgs01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CPT03_13000 DNA replication proteins [BR:pgs03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CPT03_13000 DNA repair and recombination proteins [BR:pgs03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CPT03_13000    NER (nucleotide excision repair)     GGR (global genome repair) factors      CPT03_13000    MMR (mismatch excision repair)     DNA ligase      CPT03_13000   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CPT03_13000 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 BRCT_2 PTCB-BRCT Dna2 HHH_8 HHH Motif Other DBs NCBI-ProteinID:  ATP57326 UniProt:  A0A2D1U6U6 LinkDB All DBs Position 3143195..3145207 Genome browser AA seq 670 aa AA seqDB search MSLFDIKDKMDALVKELNQHSYNYYVLAMPTIADYEFDKKLEELSKLEKEHPEFADADSP TLKVGGEITKTFTTVKHRWPMLSLGNTYNEQDLRDFDERVRKTIGESFEYVCELKFDGLS ISLTYEDTRLVRAVTRGDGTKGDDVTTNVKTINNIPHKLKNEEVPPLFEIRGEIFMHRAA FERLNKEREELGEIQYANPRNFAAGTVKMQDSKEVARRPLDCFLYSLNTDKNYFKTHWES LQTLKSWGFNVSGNSKLAGSIDEVLVFIKQWETERFKLSYDIDGIVIKVNSYAQQQELGF TAKSPRWAISFKFKAEEVETILEKVTYQVGRTGAVTPVANLKPVQLAGTTVKRATLHNAN EIERLDLYEGDSVFVEKGGEIIPKIINVNMDKRKAGALKIIYPTVCPECQSELIRKEGEV AFYCPNDEACPPQIVGKIQHFIGRKAMNIDGLGDETIETFYQKGLVKHISDLYTLHEKAE ELKTLERFGERSIENMLKGIEQSKQMPFEKVLFGLGIRYVGETVAKKLAFGTKNIDKLSI ASLEELTAIDEIGQRIAESIIEYFGNPEHLHQIGLLKSYGLQFEAIENEIALQSDKLTGK TFVISGVFENYSREELKDLIESNGGKILSGISAKLNYLLAGDNMGPSKLDKAKKLNIPLI AEGDLLEMLK NT seq 2013 nt NT seq  +upstreamnt  +downstreamnt atgtcactatttgatataaaagataaaatggatgcgctggttaaggagcttaatcaacac agttacaattattatgtattggcaatgcccaccattgcagattatgagttcgacaaaaaa cttgaggaactaagtaaactggaaaaagaacatccggaatttgcagacgccgactctcct accctaaaagttggaggcgaaataaccaaaacatttacgactgtaaaacacagatggcca atgctctcattaggaaacacctataatgagcaggatcttcgtgattttgatgagcgggta agaaaaactataggcgagagttttgaatatgtttgcgaactcaaatttgatggactttcc atcagcctgacttatgaggataccaggcttgtaagagccgttacccgcggagatggcacc aaaggtgacgatgtaaccaccaatgtaaaaacaataaacaacatcccccataaattaaaa aatgaggaagtgccccctctgtttgagatcaggggtgaaatttttatgcaccgtgcagcc tttgaacgcttaaataaagagcgagaagagcttggggaaatccaatatgctaacccgagg aattttgccgcagggacagtgaaaatgcaagactcgaaagaagtggccaggcgccctctt gattgctttctatattcattaaataccgacaagaattattttaaaactcactgggaaagc ttacagactttaaaaagttggggatttaatgtgagcggcaattcaaaactggctggtagt atagatgaggtattggtgtttattaaacaatgggaaactgaacgtttcaaattatcttat gacattgatggtattgtaattaaagtgaacagctatgcacagcaacaggaactgggcttt actgctaaatctcctcgctgggccatttcctttaaattcaaagcggaagaagtagagacc atattggaaaaggtaacttaccaggttggtcgcactggtgctgttactcctgtagcgaat ttaaaaccggtgcaacttgccggtactactgtaaagagggccaccctgcacaatgcaaat gagattgaaagattggatttgtatgagggagatagtgtgttcgtagaaaaaggcggagag ataatccccaaaataattaacgtaaacatggataaacgtaaagccggggcacttaaaatt atttaccccacagtttgtcctgaatgtcaatcggaactgatcaggaaagaaggtgaagtg gcattttactgccctaatgatgaagcttgtcccccgcaaattgtaggcaagattcaacat ttcataggtaggaaagctatgaatattgatggtcttggagacgaaaccattgaaacattt tatcagaaagggctggttaaacacatcagcgacctgtatactcttcacgaaaaggccgaa gaattaaaaactttagagcgctttggagaacgttccattgaaaatatgcttaaaggtatt gagcaatctaagcaaatgcctttcgaaaaagtcttgttcggattaggcatcaggtatgta ggcgaaactgttgccaaaaaattagctttcggcactaaaaatattgacaagctatcaatc gcaagccttgaagagctaacagctatagatgaaattggacaacgtattgcagaaagtatc attgaatattttggaaatccggaacatttacatcaaattgggcttttaaaatcctacgga cttcaatttgaagctatagaaaatgaaattgctttacaaagtgacaagttaactggaaaa acatttgtaatttcgggcgtttttgagaactatagcagagaagaactaaaggatcttata gaaagcaatggtgggaaaatattaagtggcatttcggccaaacttaattatctgcttgcc ggcgataatatgggtccgtctaaactggataaagcgaaaaaattaaatataccactgatt gcagagggtgatttattagagatgttgaaataa

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