Porphyromonas gingivalis TDC60: PGTDC60_0375
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Entry
PGTDC60_0375 CDS
T01516
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PGTDC60_0375 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgt03400
]
PGTDC60_0375 (mutS)
DNA repair and recombination proteins [BR:
pgt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PGTDC60_0375 (mutS)
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAK24544
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Position
complement(396620..399265)
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AA seq
881 aa
AA seq
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MRQYFQIKQKHPDAILLFRVGDFYETFSEDAIVASEILGITLTRRANGAAQFVELAGFPH
HALDTYLPKLVRAGKRVAICDQLEDPKKTKTLVKRGITELVTPGVSTNDNVLSHKENNFL
AAVSCDKEVFGISLLDISTGEFMAGQGNADYVEKLLTNYRPKEILVERSERSRFNDLFHW
SGFIFDMEDWAFSSENNRLRVLKHFDLKSLKGFGLEELSMAVTAAGAVLNYLDLTQHHQL
QHITSLSRLDENRYVRLDKFTVRSLELLSPMNEGGKSLLDIIDHTITPMGARRIRQWIVF
PLKDPARIQARQRVVEFFFRHTEERAIIAEHLTEIGDLERLVTKGAMGRISPREIVQLRV
ALQALEPIKEVCTHADEENLRALGEKLELCKELRDRILREVMPDAPAALGRGPVIAHGVD
ATLDELRALAYSGKDYLIKLQQQEIERTGIPSLKVAYNNVFGYYIEVRNTHKDKVPAEWI
RKQTLVSAERYITEELKEYEAKILGAEEKIAALEGQLYALLVAELQRYVAPLQQDSQAVA
SLDCLLSFAESARRYRFICPVVDESFTIDIKAGRHPVIEQQLPADEPYIANDIYLDTDRQ
QVIIVTGPNMSGKSALLRQTALISLMAQIGSFVPAESARIGMVDSIFTRVGASDNISMGE
STFMVEMQEASNILNNLTPRSLVLFDELGRGTSTYDGISIAWSIVEYIHDNPKAHPRTLF
ATHYHELNELEGQLDRVHNFNVSAREVDGKMLFLRKLEPGGSAHSFGIQVARLGGMPHHI
VQRATDILHRLEQEREKIEGEEPKTKDTKRGPSEKVKNASPTLPRDEKGRSIDGYQLSFF
QLDDPVLSQIREEILDLNIDNLTPLEALNKLNDIKRILRGY
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaatactttcagatcaagcaaaaacaccccgatgctatcttgctgttcagggtg
ggagatttctacgaaacattttcggaggatgccatcgtggcttccgagatcctggggata
acgctgacacggcgtgccaacggagctgcccagtttgtcgaattggccggctttcctcat
catgcgttggatacctatctgcccaaattggtacgagccggcaagcgcgtggccatatgc
gaccaactggaagatccgaaaaagaccaaaacgctggtcaaacgcggtattaccgaactg
gtcactcccggcgtatcgaccaacgacaatgtactctctcataaggagaacaatttcctt
gcagccgtctcctgcgacaaagaggtcttcggtatttctcttctggacatatccaccggc
gaatttatggccggacaaggcaatgccgactatgtggaaaaactcctgaccaactaccgc
ccgaaggaaatcctcgtggaacggtcggagcggtctcgcttcaacgacctcttccactgg
agcggatttatcttcgatatggaagactgggctttctcctcagagaacaatcgactacgc
gtactcaagcactttgacctgaaaagtctcaaagggttcgggctggaagagctttcgatg
gctgtaacggcagccggagccgtactgaattatctcgatctgacacagcaccatcagcta
caacacatcacatcgctgagccgactggatgaaaaccggtatgtacgcttggataagttc
accgtccgaagccttgaattgcttagcccgatgaacgagggaggcaagagtctgctcgac
atcatcgaccatacgataacgcctatgggagcaaggcgtatacgacagtggatcgtattc
ccactcaaggaccctgcacgcatacaagcccgacagcgagtggtggagtttttcttccga
catactgaagagcgagccatcattgccgaacatctgacagagataggcgacttggaacgt
ttggtgacgaaaggcgccatgggacgcatttctccgcgagaaatagtacaactgcgtgtc
gccctgcaagcactcgaaccgatcaaggaagtatgtacccatgcagacgaagagaatctg
cgcgcactgggggaaaagttggagctgtgcaaggaactacgcgacaggatattgcgtgag
gtgatgcccgatgctccggccgctctcggtcgcggccccgtcatcgcacatggcgtcgat
gccacgctcgacgaactgcgtgcactggcatacagcggcaaagactatctgatcaagcta
cagcagcaggagatagagcgaacgggaatacccagtctcaaagtagcttataacaatgtg
ttcggctactatatcgaagtccgcaacacgcacaaggacaaggtaccggccgagtggatc
cgcaagcaaacactcgtcagtgccgaacggtatattacggaagagctgaaagagtacgaa
gcaaaaatactcggagccgaagagaaaatagcagccctcgaaggacagctgtacgccttg
cttgtagccgaactgcagcgatacgtggcacctctccaacaggacagtcaagcggtggct
tctctggattgtctcctctcctttgccgagtcggcacgccgctacagatttatctgccct
gtagtggacgagagctttaccatcgacatcaaagcgggccgccaccccgtcatcgaacag
cagctaccggccgatgaaccttatatcgccaacgatatttatttggacacagaccgccag
caagtcatcatcgtcaccggccccaatatgagcggcaagtccgccctgctcaggcagacg
gcccttatctctctgatggcacagataggctctttcgttccggccgaaagtgcacgtatc
ggcatggtggacagcattttcacgcgggtgggagcttcggacaacatctccatgggcgaa
tccactttcatggtcgaaatgcaagaagcctccaatatcctgaacaatctcacgccacgc
agtctggtactgttcgacgaattaggacggggtaccagcacctatgacggcatctccata
gcctggtctatcgtggagtacatccatgacaatcccaaggcacacccccggactctcttc
gccacacattatcacgaactgaacgagctggaagggcaactcgatcgggtacacaacttc
aatgtatcggctcgcgaagtagacggcaagatgctcttccttcgcaaattggagccgggt
ggcagtgcacacagcttcggtattcaagtagcccgtctcggcggtatgccacaccatatc
gtacagcgagccacggacatcctgcatcgtctcgaacaagaaagggagaaaatagaggga
gaggagccaaaaaccaaagacaccaaacgaggtccttccgaaaaggtgaaaaatgcgtcg
cccacgcttcctcgggacgaaaaaggcaggagcatcgacggttatcagcttagcttcttc
cagctcgatgatcccgtcttgtcccaaatcagagaggagatcctcgatctgaacatcgac
aacctcacccccttggaggccctcaataagctgaacgacatcaaacgaatcctccgcgga
tactga
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