Polymorphum gilvum: SL003B_1164
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Entry
SL003B_1164 CDS
T01458
Symbol
papS
Name
(GenBank) tRNA nucleotidyltransferase/poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SL003B_1164 (papS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgv03019
]
SL003B_1164 (papS)
Enzymes [BR:
pgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SL003B_1164 (papS)
Messenger RNA biogenesis [BR:
pgv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SL003B_1164 (papS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ADZ69593
UniProt:
F2IZN6
LinkDB
All DBs
Position
1252563..1253795
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AA seq
410 aa
AA seq
DB search
MRSLSDAPWLTAQSIQQVFEALEQDGDEARAVGGAVRNTLLGVPVADVDIATTAEPATVM
KRALAHGLKPVPTGIDHGTVTVVSSGIAYEVTTLREDVETFGRHAVVRFGRDWSHDARRR
DFTMNALYVDRHGRIDDPIGGYEDCLARRVRFIGDAAERIREDYLRILRFFRIHAAYGVG
QPDPDGLHAAIRARDGLRRLSAERVGMEVKRLVTTAGAPGVIRLMESCGILEIVTGGVGR
LVDFEALRRLDRVAPEAQEAPVCLVALSGFVEEDLDRLVSRFRLSNAERERMMRAHRAAA
QLAHGADERGIRGVLFTDGRQPAIDGALLAWARSGGEAYDETWKSLLGLARNWPIPMFPV
GGRDLLKQGVAAGPALGAVLARLRAAFMDSDYTMTREDLLRLAEDTRGTA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccctgtccgatgccccctggctgaccgcccaatcgatccagcaggtgttcgag
gcgctcgagcaggacggtgacgaggcacgcgcggtcggcggggcggtgcgcaacacgctg
ctcggggttccggtcgcggacgtggatatcgccacgaccgcagagcctgccaccgtgatg
aaacgggcccttgcacatggcctcaagccggtgccgacggggatagaccacggtacggta
accgtcgtgagttcggggatagcctacgaggtcacaacgctgcgcgaggatgtcgagacc
ttcgggcggcatgcggtggtacgcttcggccgggactggagccacgatgcgcggcggcgc
gatttcacgatgaacgcgctctacgtcgaccgccatgggcggatcgacgatccgatcggc
ggctacgaggattgcctggcacgacgggtacggttcatcggcgatgcggccgagcgcatc
cgcgaggattacctcagaatcctgagatttttccgcattcacgcggcctatggtgtcgga
cagccggatccggacgggttgcatgcggcgatccgggcgcgggacggcttgcggcggctg
tctgcggaacgggtcggcatggaggtcaagcggctggtgaccaccgccggcgcgccgggc
gtcatccgtctgatggagagttgcgggatccttgaaatcgtgaccggaggcgtcggccgg
ctggtggatttcgaggcactgaggcggctggaccgggtcgccccggaggcacaggaggcg
ccggtctgcctggtggcgctgtccggcttcgtggaggaagatctggaccggctggtgagc
agatttcggctatccaacgccgagcgggagcggatgatgcgcgcccaccgggctgcggcc
cagctcgcccacggtgcggacgagcgtggcatccggggtgtgctgttcacggatgggcgc
cagccggcgatcgatggcgcgctcctcgcctgggcccgcagcggcggggaagcctacgac
gagacctggaaatcccttctcggcctggcccggaactggccgatcccgatgttcccggtc
ggcggccgggacctcctgaagcaaggtgtcgccgcggggccggcgctgggcgcggtgctg
gcgcggctgagggccgcgttcatggacagcgactacacgatgacgcgcgaggacctgctc
cgcctggccgaagacacccgcggcacggcgtag
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