KEGG   Polymorphum gilvum: SL003B_1350Help
Entry
SL003B_1350       CDS       T01458                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase B
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pgv  Polymorphum gilvum
Pathway
pgv00473  D-Alanine metabolism
pgv00550  Peptidoglycan biosynthesis
pgv01100  Metabolic pathways
pgv01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pgv00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    SL003B_1350 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SL003B_1350 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    SL003B_1350 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pgv01011]
    SL003B_1350 (ddl)
Enzymes [BR:pgv01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     SL003B_1350 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:pgv01011]
 Precursor biosynthesis
  Amino acid ligase
   SL003B_1350 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID: ADZ69778
UniProt: F2J282
LinkDB All DBs
Position
1451612..1452538
Genome map
AA seq 308 aa AA seqDB search
MTGKHVAVLMGGWVNERPVSLSSGRACADALEARGYRVTRIDVDRTIAAVLAEAKPDVAF
NALHGPFGEDGCIQGILEILQIPYTHSGVMASALAMNKVKAKAVMAAAGVPVTEHRIVDR
RSIGSEHPMAPPYVLKPINEGSSFGVLIVKEDAQFPPQELSRDDWPYPDVLMCERYIPGR
ELTCAVMGDRALGVIDIVPLGHGFYDYEAKYAEGGSQHILPAKISPIIYQEVQKLTLTAH
QALGCRGVSRADFRFDEKADGTSSLICLEVNTQPGMTPTSLVPELAAHEGYDFGDLVTWM
VEDASCCR
NT seq 927 nt NT seq  +upstreamnt  +downstreamnt
atgactggaaaacatgttgcggttctgatgggcggctgggtcaacgaacggcccgtgagc
ctgagttcgggcagggcctgcgccgatgctctcgaggcgcgcggctaccgcgtgacccga
atcgacgtcgatcggaccatcgccgcggtgctggccgaggcgaagcctgacgtcgccttc
aacgccctgcacggtccgttcggcgaggacggctgcatccagggcatcctggagatcctt
cagatcccctacacgcattccggtgtcatggcctcggcgctcgccatgaacaaggtcaag
gccaaggccgtcatggcggcggccggcgtgccggtcacggagcaccgcatcgtcgaccgg
cgcagcatcggcagcgagcacccgatggcgccaccctacgtgctcaagccgatcaacgag
gggtcgagcttcggcgtgctgatcgtcaaggaggacgcgcagtttccgccgcaggaactc
agccgcgacgactggccctaccccgacgtgctgatgtgcgagcgatacatccccggtcgg
gaactgacctgcgcggtcatgggcgaccgtgcgctcggggtcatcgacatcgtgccgctc
ggacacggcttctacgactacgaggcaaagtacgccgaaggcggttcacaacacattctt
cctgcgaaaatttcaccgattatttaccaagaagtccagaaacttaccctgacggcgcat
caggctctcgggtgtcgcggcgtgtcgcgggcggatttccgcttcgacgagaaggccgat
ggaacgagctccctgatctgcctggaagtgaacacccaacccggcatgacgccgacgtct
ctggttcccgaactggctgcccatgagggatatgatttcggagacctcgtcacctggatg
gtggaggatgcaagttgctgtcgctga

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