Polymorphum gilvum: SL003B_1350
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Entry
SL003B_1350 CDS
T01458
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv00470
D-Amino acid metabolism
pgv00550
Peptidoglycan biosynthesis
pgv01100
Metabolic pathways
pgv01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SL003B_1350 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SL003B_1350 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SL003B_1350 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgv01011
]
SL003B_1350 (ddl)
Enzymes [BR:
pgv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SL003B_1350 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
pgv01011
]
Precursor biosynthesis
Amino acid ligase
SL003B_1350 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ADZ69778
UniProt:
F2J282
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All DBs
Position
1451612..1452538
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AA seq
308 aa
AA seq
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MTGKHVAVLMGGWVNERPVSLSSGRACADALEARGYRVTRIDVDRTIAAVLAEAKPDVAF
NALHGPFGEDGCIQGILEILQIPYTHSGVMASALAMNKVKAKAVMAAAGVPVTEHRIVDR
RSIGSEHPMAPPYVLKPINEGSSFGVLIVKEDAQFPPQELSRDDWPYPDVLMCERYIPGR
ELTCAVMGDRALGVIDIVPLGHGFYDYEAKYAEGGSQHILPAKISPIIYQEVQKLTLTAH
QALGCRGVSRADFRFDEKADGTSSLICLEVNTQPGMTPTSLVPELAAHEGYDFGDLVTWM
VEDASCCR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgactggaaaacatgttgcggttctgatgggcggctgggtcaacgaacggcccgtgagc
ctgagttcgggcagggcctgcgccgatgctctcgaggcgcgcggctaccgcgtgacccga
atcgacgtcgatcggaccatcgccgcggtgctggccgaggcgaagcctgacgtcgccttc
aacgccctgcacggtccgttcggcgaggacggctgcatccagggcatcctggagatcctt
cagatcccctacacgcattccggtgtcatggcctcggcgctcgccatgaacaaggtcaag
gccaaggccgtcatggcggcggccggcgtgccggtcacggagcaccgcatcgtcgaccgg
cgcagcatcggcagcgagcacccgatggcgccaccctacgtgctcaagccgatcaacgag
gggtcgagcttcggcgtgctgatcgtcaaggaggacgcgcagtttccgccgcaggaactc
agccgcgacgactggccctaccccgacgtgctgatgtgcgagcgatacatccccggtcgg
gaactgacctgcgcggtcatgggcgaccgtgcgctcggggtcatcgacatcgtgccgctc
ggacacggcttctacgactacgaggcaaagtacgccgaaggcggttcacaacacattctt
cctgcgaaaatttcaccgattatttaccaagaagtccagaaacttaccctgacggcgcat
caggctctcgggtgtcgcggcgtgtcgcgggcggatttccgcttcgacgagaaggccgat
ggaacgagctccctgatctgcctggaagtgaacacccaacccggcatgacgccgacgtct
ctggttcccgaactggctgcccatgagggatatgatttcggagacctcgtcacctggatg
gtggaggatgcaagttgctgtcgctga
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