Pseudomonas glycinae: AWU82_15450
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Entry
AWU82_15450 CDS
T06994
Name
(GenBank) type IV secretion protein Rhs
Organism
pgy
Pseudomonas glycinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
MafB19-deam
dCMP_cyt_deam_1
DUF4595
EACC1
SURNod19
Motif
Other DBs
NCBI-ProteinID:
AMQ87127
LinkDB
All DBs
Position
complement(2016435..2021159)
Genome browser
AA seq
1574 aa
AA seq
DB search
MTTGGGGAKQREPQVAVVPLNTIDIQDVGRGAAKFDAWLQSISGGVVTLDRVKNVAGALP
VVGNIMALVDALGDIVTLAKSKQRQVLDWVSLGINLIGVLPAPPTMASARMTLRPTLGLV
RQELRNSAKMLLGDSLIEVLIGHLNATIVGTIDDFVKQAQPKLAGILDDAGKLGQSAVNE
IAKGLETVVNGKLDAKGDLNAAGSKLTAARGQLLHDPKAAISNIFGAAFGAYKAAGKGVA
NSAAKNLLPEKAKALVLGNTSMLRNLGVELRTQLKKLADPGVQHSIGWLLQMLAGAVVTW
RKRRSHGQSATVKPGGTSKAQRRAGDGQLEMQSKQAGAKADANCRKNGVCPITAHSISFA
MGSETFNHTDFSLPGPFPVTWTRTYYSRLDAYDKGVCGARWITEFTTRFDRVDDGVVYHA
ADGRSHNYPLPKVGEAHYDPIESLTLVRVDENQLVLCSGVERKETYVRRGQRYLLSGIVL
RSGAGIMLHYEHRHNDEVVLSDLITYQGDVSRVHLQLGTLIDDQGRLIGLWEIRDGAPWR
QLCAYVYDDAGDLIQAQDENAAVWSYQYQHHLITRYTDRTGRGMNLQWQGQGADARAIRE
WADDGSYDTRLEWDENIRLTYVTDAHGNETWHYYDILGYTYRIRHPDERSEWLFRDDAKN
IVRHVHTDGSIDRFSYDDRGNVLEHIRADDTVLHFAYDDQDQLIKISDAEGGLWLRDYDP
QGNLVEAVDPLGNKTEYTYTPAGLLTAIKDANGAEKKLEYNDAGQLTKYTDCSGKSSTWE
YDSRGQTICFTDAAGQSTEYEYQAGQLVLIKHPDKSEERFTRDAEGRLLIHIDGLGRCTS
WSYTAAGLVAERVDAAEQTLRYRWDRLGRLSALENENEQRAQFEYDPVGRLLHETGFDGR
SKHYQYDPDTGRLASTRDGERVTELRFDPMNRLISRLARLGGESQEETFAYDGNGNLVLA
SNDKSRLQWFHDPAGNLLREHQHYSVLEKPTVAVWQHEYDALNQRVATVRPDGHRISWLT
YGSGHLLGMRLDEHDLIGYERDDLHREVARHQGNRLFQTQKWDPAGRLQQQLLGHSDDKR
ILLKREYQYDAAGQLNGIHDTRRGPIGYQYDPVGRLLNATSRLGVETFAFDPAGNLMDAK
AEQVRRPLDQYPTRSKLLDNLLREYAGSHYDYDDRGNLIQRWHNASISRMRWDLFDRLVH
FDDARLEIDFAYDALGRRLYKHSRAHFKQHPEAGSQWNQNELSRRQRELGCSFTLYGWDG
DNLAWESSLSQTDGDPGRTVHYIYEPGTFVPVAQALRHQSINLFAEPHYSDDYRLADDPL
WSIVPKAPPIDVLSWYQCDHLGTPQELTNQNGEIVWSAQYKAWGTAIEKRSEWALQQGLA
NPIRFQGQYHDHETGLHYNRYRYYDPDVGRFISKDPISYAGGLNLYAYAPNPTGWVDPLG
LEGCDPRQQLADRRKALGLPVAGSAEDTSTLAILKFNDQSFEGINSSAQNPKTPITLERV
NAQTKTHAEAEAVQHAVNAGMAGKAESAEMWVDRDPCKACGLPGAGGIRSLARNLGCNIT
VHSPSGSRTYTPTK
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgggggcggtggtgcgaaacagcgtgagccgcaagtcgcggtggtacccctc
aacacgatcgatattcaggatgtcggacgcggcgctgccaaattcgatgcctggttgcag
tccatcagcggcggtgtcgtcacacttgatcgggtcaagaacgtcgcgggtgctcttcct
gtcgtgggcaacatcatggcgttggttgatgccctcggagacatcgtcaccctggccaaa
agcaaacagcgtcaggtgctggattgggtcagcctgggtatcaacctgattggtgtattg
cctgcgccgccgaccatggcttctgcgcgcatgacactacgcccgaccctggggctggtg
cgtcaggaactgcgtaacagcgccaagatgctgctgggggactcgctgattgaagtgttg
atcgggcatctgaacgcgaccatcgtcggcaccatcgatgacttcgtcaaacaggcacaa
cccaaactggcgggcattctcgacgacgctggaaagctgggtcaaagcgcggtgaacgag
attgccaagggcctggaaacggtggtcaacggcaagcttgacgccaaaggcgaccttaac
gcggcaggttcaaagctcaccgcggcacggggccagttactgcatgatcccaaggcggcc
atcagcaatatctttggcgctgcatttggcgcctacaaggctgcaggaaaaggggtggcc
aatagtgcagcgaaaaatctgctgccggaaaaagccaaggccttggtactgggtaataca
tccatgctgcgtaatctgggtgtagaactgcgaacccagctgaaaaaacttgccgatcca
ggtgtgcagcactctatcggctggttgttgcagatgctggcgggggcggtagtgacctgg
cgcaaacgcaggtctcatggccagagcgcaacggtcaaacccggcggaacgagtaaagcc
caacgcagggccggggacgggcaactggagatgcagtcaaagcaggcaggcgcgaaagcc
gacgccaactgccgcaagaacggtgtgtgtcccatcaccgcccatagcatcagctttgcc
atgggatcggagactttcaatcacacggacttcagcctgcccggcccgtttccggtcacc
tggactcgcacctattactcacgtctggatgcctacgacaagggcgtctgcggtgctcgc
tggattaccgagttcaccacccgatttgatcgcgtcgatgacggggtggtgtaccacgca
gctgatggtcgcagccacaactaccctctgcccaaagtgggtgaagctcactacgacccg
atcgagagcctcacgctggtacgcgtcgacgagaaccaattggtgctgtgcagcggtgtc
gagcgcaaggaaacctatgttcgtcgaggtcagcgctatctgctgagtggaatcgtactg
cgcagcggtgcgggaatcatgctgcactacgaacatcgccataacgatgaagtcgtgttg
tcggatctgatcacctaccaaggggacgtttccagggttcatttgcaactcggtacattg
atcgacgatcaggggcgtttgatcggcctctgggaaattcgcgacggtgcgccctggcgt
cagctgtgcgcctatgtttatgacgacgccggggacttgatacaggctcaggacgaaaat
gcggcggtctggagttaccagtaccagcatcacctcatcacccgatacaccgatcgcacc
ggacgcggtatgaatctgcaatggcagggacagggcgccgatgcgcgggcgatacgcgaa
tgggccgatgacggcagctacgatacccggctggagtgggatgaaaatattcgcctgact
tacgtcaccgatgcccatggcaatgagacttggcactactacgacatccttggctacacc
tatcgtatccgtcatcccgacgaacgctcggaatggctgtttcgcgatgacgcaaaaaac
atcgtgcgccatgttcataccgacggcagcatcgatcgattcagctatgacgatcgcggg
aacgtactcgaacatatccgggccgacgatacggtcctgcactttgcctacgacgaccag
gatcaactgatcaagatcagcgacgcggagggtggcctgtggcttcgcgattacgatcca
cagggcaatctggtagaagccgtcgacccattgggtaacaagaccgaatacacctacacc
ccggccggtctgctcacggccatcaaggatgccaacggcgccgagaagaaacttgagtac
aacgacgctggccagttgaccaagtacaccgattgctccggaaaaagcagcacctgggaa
tatgacagtcgagggcagacgatctgtttcaccgatgcagccgggcaaagtaccgagtac
gaatatcaggcgggtcaactggtactgatcaaacatccggacaaatccgaagagcgattc
acgcgcgatgccgaaggtcgattactgatccacatcgatggccttggtcgctgcacctcc
tggagttacaccgctgccggtctggtggcggagcgggtggacgctgccgagcagacattg
cgctatcgctgggatcggctcgggcgcttgtcggccctggaaaacgaaaatgaacagcga
gcgcagttcgagtacgacccggtagggcggctgctccacgaaaccggcttcgacggtcgg
agcaagcactaccaatacgatcctgataccgggcgtctagcctcgacgagggatggggag
cgcgttactgaattgcgcttcgatccgatgaaccgcctgatctctcgtcttgcaagactt
ggcggtgagtcgcaggaagaaacctttgcctacgatggaaacggcaacctggtgctcgcc
agcaatgataagagtcgcttgcagtggtttcatgacccggcaggtaacctgttgcgcgag
catcagcattattcggtactggaaaaaccgacggttgcggtctggcagcacgaatatgat
gcgctgaatcagcgagtggccactgtgcgtccggatggacaccggatcagttggctgacc
tacggcagtggccacttgttgggaatgcggctggatgagcacgacctgatcggttacgag
cgtgatgatctgcatcgtgaagtcgcccgacatcagggcaatcgccttttccagactcaa
aaatgggaccctgccggtcgcttgcaacaacaattgctgggacacagtgatgacaagcgc
atcctgctcaagcgcgagtatcaatatgacgcggcgggccaattgaatggtatccatgac
actcgccgtgggccgatcggctatcaatacgacccggtaggtcgtctgctcaacgccacc
agtcgtctgggtgtggaaaccttcgcgttcgatcccgccggcaatttgatggatgccaag
gctgaacaggttcggcgaccgttggaccagtatccgacccggagcaagcttctcgacaat
ttgttgcgtgagtacgctggcagtcattacgactatgacgaccgtggcaacctgattcag
cgctggcacaacgcgagtatcagccggatgcgctgggacctgttcgatcgcctggtgcat
ttcgatgatgcccgtctggaaatcgacttcgcctacgatgcgctgggtcggcggctgtac
aagcattcacgtgcgcacttcaagcaacaccccgaagccgggtcgcagtggaaccagaac
gaactgtcacgtcggcaaagagaactgggttgtagtttcacgctgtacggctgggacggc
gacaacctggcctgggaaagcagcctttcacagaccgacggcgatccggggcggacggtg
cactacatctatgagcccggcacgtttgttcccgtggcccaggctttacggcaccaatcg
atcaacttgtttgccgagcctcattacagcgatgactatcgtctggccgatgatccgtta
tggagcattgtgcccaaagcaccaccgatcgatgtcttgagctggtatcagtgtgaccac
ttgggcacaccacaggagctgaccaaccagaacggggagatcgtctggagtgcacagtac
aaggcatggggtactgccattgaaaaacgttcggagtgggcactgcagcaagggctggca
aacccgattcgttttcaggggcaataccacgatcatgagacagggctgcattacaaccgg
taccgatattacgatcctgacgttggccgtttcatcagcaaggatccgatcagttatgca
ggcggcctgaatctatatgcctatgcgcctaacccgacaggctgggttgacccactgggt
cttgagggctgtgatccaaggcaacaactggccgaccgaagaaaggcattgggccttccg
gttgcaggttctgccgaagacacatcgacactggcgattttgaagttcaacgaccagagt
ttcgagggtataaactcaagcgctcaaaatcccaaaacgcctattacacttgagcgggta
aatgcgcagaccaaaacccacgcagaagccgaagcggtgcagcatgcggtcaatgcgggt
atggcaggcaaggccgaaagtgcggaaatgtgggtggatcgagacccttgcaaggcttgc
ggacttccgggagccggggggattcgatcactggctcgaaacctgggatgcaatatcacc
gtacactcgccaagtggcagtcgaacttacacaccaacgaagtag
DBGET
integrated database retrieval system
