Pseudoalteromonas translucida TAC125: PSHAa0122
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Entry
PSHAa0122 CDS
T00282
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II; highly similar to PSHA_1_2804
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha03420
Nucleotide excision repair
pha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSHAa0122 (uvrD)
03430 Mismatch repair
PSHAa0122 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAa0122 (uvrD)
Enzymes [BR:
pha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSHAa0122 (uvrD)
DNA repair and recombination proteins [BR:
pha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSHAa0122 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PSHAa0122 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
AAA_11
SAP18
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAI85226
UniProt:
Q3IDF8
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All DBs
Position
I:complement(131383..133548)
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AA seq
721 aa
AA seq
DB search
MDVSQLLDGLNDKQRDAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEQASTYSIFAV
TFTNKAAKEMRTRVEETLKAPVGGMWIGTFHGLSHRILRAHHREAKLPEAFQILDSDDQL
RMIKRLLKSMNIDDKKWPAKQFGWYISAKKDEALRPKDIQAYDINEQMMLRVYAAYQEAC
DRAGLVDFAEILLRSYEVLKNNPTLLRHYQQRFAHMLVDEFQDTNTIQYAWLKLLAGDSN
SIMIVGDDDQSIYGWRGAKIENIKRFLTDFSAETIRLEQNYRSTATILKASNALIQNNSE
RMGKSLWTDGNEGEPISIYAAFNELDEARFVSSKLRSWLNAGNALQDAAILYRSNAQSRV
LEEAMLQEGLKYRIYGGMRFFERQEIKDALSYLRIIGNRQDDAAFERVINTPARGIGDKT
LSHIRDCARAESLPLWYAAKAIVEQQHLSGRASGAVSKFVELVEHIEDKISDLTLHEQAK
YVIQTSGLMAMYQAEKGEKGRARVENLEELISACDQYELPEEEEYSSPLQGFLAHTSLES
GEGQAEEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSNEESGRLEEERRLCYVG
MTRAMDKLYISHAESRRLYGQEKYHTPSRFLREIPEDCVEEIRIKTQVSRPPAAGRFSAS
VSHAAFEDSGFNLGQRVLHAKFGIGTVLNYEGAGAQSRVQVNFDDLGSKWLVTAYARLQA
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcacaattactcgatggcttaaacgacaaacaacgcgatgccgttgcagcc
ccactacaaaacatgctggtattagcaggtgctgggtctggtaaaacacgagtgttggtt
catcgtattgcttggctaatgcaagttgagcaagcctcaacgtatagtatttttgcggtt
acctttactaataaagcagctaaagagatgcgtactcgcgttgaagagacgctaaaagcg
ccggttggtggtatgtggattggtactttccatggtttgtcgcaccgtattttacgcgcg
caccaccgtgaagcaaaattacccgaagcatttcaaattttagactcagacgatcagcta
cgtatgatcaaacgtttattaaaatcgatgaatattgatgataaaaaatggcccgctaaa
cagtttggttggtacataagcgctaaaaaagatgaagcacttcgccctaaagatattcaa
gcctacgatattaacgagcaaatgatgctgcgcgtgtacgcggcgtatcaagaagcatgc
gacagagcaggcttagtcgattttgccgaaatactactgcgcagctacgaagtactcaaa
aataaccctacactactgcgccattatcaacagcgctttgcacacatgttagtagacgag
tttcaagacaccaacaccatacaatacgcatggttaaaactacttgctggcgactccaat
agtattatgattgttggcgatgacgatcagagtatctatggttggcgcggtgcaaaaata
gaaaacattaaacgttttttaactgactttagcgcagagaccattcgtcttgagcaaaac
tatcgctcaaccgccactatattaaaagcctcaaatgccctgatccaaaataactcagag
cgtatgggtaaaagcttatggaccgacggtaacgagggcgaacctatttctatttacgcc
gcatttaacgagctagacgaagcgcgttttgtaagtagtaaactgcgtagttggttaaat
gccggcaatgcgctgcaagatgcggctattttatatagaagtaatgcgcaatcacgtgta
cttgaagaagccatgctacaagaaggcctaaagtatcgtatttatggcggcatgcgattc
ttcgaacgccaagaaattaaagacgccctgtcgtacttacgcataataggtaaccgtcaa
gacgatgctgcatttgaacgagtaattaatactccagctcgtggtattggcgataaaacg
ctaagccatatacgcgactgtgcacgcgccgaatcgttaccactttggtatgcagcaaaa
gcaattgtagagcaacaacatttatctggccgcgcttctggtgcagtgagtaagtttgtc
gaactagtagagcatattgaagataaaattagcgatctaacgctacatgagcaagctaaa
tacgttattcaaacttctgggttaatggcaatgtaccaagccgaaaaaggtgaaaaaggc
cgtgcccgagtagaaaacttagaagaacttattagcgcttgcgatcagtacgaattgcct
gaggaagaagaatatagctctcctctacaaggctttttagcgcatacctcgcttgaatct
ggtgaaggacaagcagaagagcacgaagacgccgtacaaatgatgacattgcactcagct
aaaggtttagaatttccgttagtgtttatggttggcgtagaggaaggtatgttcccttct
caacaaagtaatgaagagtctggccgtttagaagaagaacgccgcctttgttatgtaggt
atgacccgcgctatggataaactatatattagccatgccgaaagccgtcgtttatatgga
caagaaaaataccatacaccatcgcgctttttacgggaaattcccgaggactgtgttgaa
gaaattcgtattaaaacccaagtatctcgaccacccgctgcagggcgttttagcgcatca
gttagtcacgctgcatttgaagatagcggctttaacttggggcaacgtgtactgcatgct
aaatttggtattggtacagtacttaattacgaaggtgcgggtgcgcaatctcgcgtacaa
gtcaactttgatgatttaggtagtaagtggttagtaacggcatatgcaagactacaagct
atataa
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