Pseudoalteromonas translucida TAC125: PSHAb0055
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Entry
PSHAb0055 CDS
T00282
Symbol
sbcD
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pha
Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAb0055 (sbcD)
DNA repair and recombination proteins [BR:
pha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSHAb0055 (sbcD)
Archaeal homologous recombinant proteins
PSHAb0055 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Fer4_12
Cation_ATPase
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
CAI89105
UniProt:
Q3ICS5
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All DBs
Position
II:complement(61688..62935)
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AA seq
415 aa
AA seq
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MKVLHTSDWHLGQQFYEYDRRHEHLAFFTWLLATLVEQQIDLLLVAGDIYHTATPSASAE
NQLYQFIKDAKKQCPNLHVVIIAGNHDSANRILAAQPLLAQFDTHVVGRFEATAAADTVI
TINTNKKRAVIVAMPFLRASDVTTLSQTKSGPSYAQGVKKAYELALEHAATLQSENTPLI
VMGHLHAKGGDISSDSERNLVIGGEEAISANVFGKQAHYVALGHLHKAQQVAKNECIRYS
GTPIPMSFSERNYSHQVNVVEFNSDEKQQISVTVNPLYIPRLADVIVLPKGECVPLAELC
EEIKALDTTANTIAPYLRVKLKSSDTDTTFREQIEQALEGKHIRFCGIERVREQAANNEG
GAVFEDLTEVEMLNPLNLLEQAFANDKDMHGESVPDALKNLLNDVINELEEQQQL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctgcacacttctgattggcaccttggccaacaattttatgaatatgaccgt
cgtcatgaacaccttgcttttttcacttggctgttagccactctcgttgagcaacaaata
gatttactgctcgttgctggcgatatttatcatactgcaacccccagtgctagcgccgag
aatcaactctatcaatttattaaagatgccaaaaagcagtgccctaatttacatgtagta
attattgctgggaaccacgactctgcaaatcgtattttagccgcgcaaccgttactcgct
caatttgatacccatgttgtagggcgttttgaggcaacagcagcggctgataccgtaatc
actattaacactaacaaaaaacgcgctgtaatcgttgccatgccatttttgcgcgcaagc
gatgtaactacactcagccaaaccaaaagcggccctagctatgcccaaggcgttaaaaag
gcatatgaacttgcccttgagcatgcagctactttacaaagtgaaaataccccgttaatt
gttatggggcaccttcatgctaaaggcggcgatatatcgagtgactctgagcgcaactta
gtaataggcggcgaagaagccatatctgccaacgtatttggtaaacaagcacactacgtt
gcgctggggcatttacataaagcgcagcaagttgctaaaaatgaatgcattagatacagc
ggtacgccaattcctatgtcgttttcagagcgaaattacagccaccaagtaaatgtagtt
gaatttaatagcgatgaaaaacagcaaattagtgtaactgtaaaccccctttacattcct
cgtttagccgatgtaatagttttaccgaaaggggagtgcgtaccattagctgagctatgc
gaggaaattaaagccctcgacaccacagccaatacaatagcaccatatttacgggtaaaa
cttaaatctagcgataccgacaccaccttcagagaacaaatagaacaagctcttgagggt
aaacatattcgtttttgtggcatagagcgcgtgcgcgaacaagcagctaacaatgaaggc
ggcgcagtatttgaagatttaactgaagttgaaatgctcaacccacttaatttattagaa
caagcatttgcaaacgacaaagatatgcacggtgaaagcgtacccgacgcactaaaaaat
ctattaaacgatgttattaacgaactagaggagcaacagcaactatga
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