Pseudoalteromonas translucida TAC125: PSHAb0462
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Entry
PSHAb0462 CDS
T00282
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta (NS1) (HU-1)
KO
K03530
DNA-binding protein HU-beta
Organism
pha
Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pha03032
]
PSHAb0462 (hupB)
03036 Chromosome and associated proteins [BR:
pha03036
]
PSHAb0462 (hupB)
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAb0462 (hupB)
DNA replication proteins [BR:
pha03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSHAb0462 (hupB)
Chromosome and associated proteins [BR:
pha03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PSHAb0462 (hupB)
DNA repair and recombination proteins [BR:
pha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PSHAb0462 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Arteri_nsp7a
HYPK_UBA
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CAI89499
UniProt:
Q3ICD1
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All DBs
Position
II:520113..520388
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AA seq
91 aa
AA seq
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MNKAQLVEKIATDAEISKAAATRALDAFTGAVTSSLKEGDSVALVGFGTFSVKERAARTG
RNPQTGAEIQIAAATIPSFKAGKGLKDQVNL
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctcaattagttgaaaaaattgctactgatgcagaaatctctaaagccgct
gctacacgcgctcttgacgcgtttactggcgctgtaacttcttctttaaaagaaggtgat
tcagtagcgttagttggttttggtactttttcagttaaagaacgtgcagcacgtactggc
cgtaacccacaaacgggtgctgagatccaaatcgcagcggcaactatcccaagctttaaa
gcaggtaaaggtcttaaagatcaagtaaacctttaa
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