Peptoniphilus harei: NCTC13077_00852
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Entry
NCTC13077_00852 CDS
T05838
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phar
Peptoniphilus harei
Brite
KEGG Orthology (KO) [BR:
phar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phar03016
]
NCTC13077_00852 (truB)
Enzymes [BR:
phar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC13077_00852 (truB)
Transfer RNA biogenesis [BR:
phar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC13077_00852 (truB)
Prokaryotic type
NCTC13077_00852 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
VEJ34112
LinkDB
All DBs
Position
1:896539..897429
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AA seq
296 aa
AA seq
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MIDGLLVFDKDKGITSHDLVYKVRRKLGIKKVGHTGTLDPMATGVLVISIGKATKTSEYI
LSSDKEYEAKIKLGILTDSYDIAGNILKEEKVIFNEEDIKKALQNFTGKLSQKPPIYSAL
KVGGKKLYEYAREGKEVEIKERNIEIYKNELLDFNGSDEFLIRVKVSKGTYIRSLANDIG
NFLGTYGTLTELRRIRTGNFKIEDSINSSDFENMSIDEIKEKILPMDLALTNLKKIDLDK
RFLNKFLNGQFYRLNHKPEVDNYRVYCENLFLGIGEIRFIDEKPYLKMKKRLIGDL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgattgatggtctcttagtatttgacaaggataaaggaataacatcccatgatttagtt
tataaggttaggcgcaaattagggataaaaaaagtaggtcatactggtactcttgatcct
atggctacaggagtgctagttatatctattggaaaagcaactaaaacaagcgaatatatt
ctttcaagtgacaaggaatacgaagctaaaatcaaactaggtatcttgaccgattcatat
gatattgctggtaatattttaaaagaagaaaaagttatcttcaatgaagaagacataaaa
aaagctcttcaaaattttactggtaagttgtcacaaaagcctcctatttactctgcttta
aaagtgggtggtaagaaactttacgagtatgcaagagaaggtaaagaggtagaaataaaa
gaaagaaatattgagatttataaaaatgaacttttagattttaacggaagtgatgaattc
ctaataagagttaaggtatctaagggaacttatataaggtctcttgcaaatgatattggg
aactttttaggcacttatggtacactaacagagcttagaagaataagaactggaaatttt
aaaatagaggattctattaatagctctgattttgaaaatatgtctattgatgaaataaag
gaaaaaattctaccaatggatttagccttaactaatcttaaaaaaattgatttagacaaa
agatttcttaataaatttcttaatggacaattttacaggcttaatcacaagccagaagtt
gataattacagagtgtattgcgaaaatctttttttaggaattggagaaattagatttatt
gatgaaaaaccttatcttaagatgaagaagagattaataggtgatttatga
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