KEGG   Pantholops hodgsonii (chiru): 102329173Help
Entry
102329173         CDS       T02909                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
phd  Pantholops hodgsonii (chiru)
Pathway
phd00310  Lysine degradation
phd04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:phd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102329173 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    102329173 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phd03036]
    102329173 (SETDB1)
Enzymes [BR:phd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     102329173 (SETDB1)
Chromosome and associated proteins [BR:phd03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102329173 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102329173 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537 Chromo
Motif
Other DBs
NCBI-GeneID: 102329173
NCBI-ProteinID: XP_005970750
LinkDB All DBs
Position
Un
AA seq 1318 aa AA seqDB search
MSFRGLKFSIVVMINSKSNFSFLLHVEDSNMSSLPGCIGLAAATAAVESEEIAELQQSVV
EELGISMEELRQFIDEELEKMDCVQQRKKQLAELETWVIQKESEVAHVDQLFDDASRAVT
NCESLVKDFYSKLGLQYRDSSSEDEASRPTEIIEIPDEDDDVLSIDSGDAGSRTPKDQKL
REAMAALRKSAQDVQKFMDAVNKKSSSQDLHKGTLSQMPGELSKDGDLVVSMRILGKKRT
KTWHKGTLIAIQTVGSGKKYKVKFDNKGKSLLSGNHIAYDYHPPADKLYVGSRVVAKYKD
GNQVWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDISCR
DFIEEYITAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGSLVRILFLDDKRCEWIYR
GSTRLEPMFSMKTSSASALEKKQGGQLRTRPNMGAVRSKGPVVQYTQDLTSTGTQFKPME
PPQPTAPPAPPGPAVSPQAGDSESLEGQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPAL
SENAPGGKPGINQTYRSPLGTTTSAPAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYL
PHVCSYTCLSRVRPMRSEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLC
LRTMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCV
NEIDTTPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACT
PGGQINPNSGYQYKRLEECLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKG
WGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDA
PCSSDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQ
KENGLSEMSSKDSRPPDLGPPHIPVPPSIPVGGCNPPSSEETSKNKVASWLSCNSISEGG
FADSDSRSSFKTSEGGEGRTGGGRGEAEKASTSGLGFKDEGDIKQAKKEDPDDRNRMSIV
TESSRNYGYNPSPVKPEGLRRPPSKTSMHQSRRLVASAQPNPDDILTLSSSTESEGESGT
SRKPTAGQTSAAAMDSDDIQTISSGSEGDDFEDKKNMSGPMKRQVAVKSTRGFALKSTHG
IAIKSTNMASVEKGESAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQN
VFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAXXXCRGRLL
NT seq 3957 nt NT seq  +upstreamnt  +downstreamnt
atgagttttaggggactgaaattctctattgtggttatgatcaactccaaaagtaatttt
agtttcctgctccatgtagaggacagcaatatgtcctccctccctgggtgcattggtttg
gcagcagcaacagcagcagtggagtctgaagaaattgcggagctgcaacagtccgtggtt
gaggagctgggtatctcaatggaggagcttcgacagttcattgatgaagaactggaaaag
atggactgtgtacagcagcgcaagaagcaactagcagagttggagacttgggtaatacag
aaggaatctgaggtggcccatgttgaccaactctttgatgatgcatctagggcagtgact
aactgtgagtctttggtgaaggacttttattccaaactgggactacagtaccgggacagc
agctctgaagatgaagcttcccggcctacagaaataattgagattcctgatgaagacgat
gatgtcctcagtattgattcaggtgatgctgggagcagaactccaaaagaccagaagctc
cgtgaagctatggctgccttaagaaaatcggctcaagatgtccagaagttcatggatgct
gtcaacaagaagagtagttcccaggatcttcacaaaggaaccttgagccagatgcctgga
gaactgagcaaagatggtgacttggtcgtcagcatgcgcatcctcggcaaaaaaagaact
aagacatggcacaaaggcacccttattgccatccagacagttgggtcaggaaagaagtac
aaggtgaaatttgacaacaaaggaaagagtcttctgtcaggaaaccacattgcctacgat
taccaccctcctgctgacaagttgtatgtgggcagtcgagtagtggccaaatacaaagat
gggaatcaggtctggctctatgctggcattgtagctgagacaccaaacgtcaaaaacaag
ctcaggtttctcatcttctttgatgatggctatgcttcctatgttacgcagtctgaacta
tatcccatttgccggccactgaaaaagacttgggaggacatagaagacatctcctgccga
gacttcatagaagagtatatcaccgcttaccccaaccgccccatggtgttgctcaagagt
ggccagctgatcaagactgagtgggaaggcacgtggtggaagtcccgagtcgaggaggtg
gacggcagcctagtcaggatcctctttctggacgacaaaagatgtgagtggatctatcgc
ggctctacacgactggagcccatgttcagcatgaagacatcatccgcctctgcactagag
aagaagcaagggggacagctcagaacacgtccaaatatgggtgctgtgagaagcaaaggt
cccgtggtccagtacactcaggatctaacaagtactggaacccagttcaagcctatggaa
cccccacagccgacagccccacctgccccacctggtccagctgtgtccccccaggcaggt
gacagtgaaagcttggaaggccagcttgcccaatctcggaagcaggtagccaaaaaaagc
acatctttccggccaggatctgtgggctctggtcattcctcccctacatcccctgcactc
agtgaaaatgcccctggtgggaaacctgggatcaatcagacatataggtcacctttaggc
accacaacctctgccccagctcccccagctcccccagcacccccagccttccatggcatg
ctggagcgggcccctgcagagccctcctaccgtgcccccatggagaagcttttctactta
cctcatgtctgcagctatacttgtctgtctcgagtcagacctatgagaagtgagcagtat
cggggcaagaaccctctgttagtcccactactgtatgacttccggcgaatgacagcccgg
cgccgagttaaccgcaagatgggctttcatgttatctataagacaccctgtggcctctgc
cttcggacaatgcaggagattgagcgttacctttttgagactggctgtgacttcctcttc
ctggagatgttctgtttggatccgtatgttcttgtggaccggaagtttcagccctataag
cctttttactatattttggacatcacctatgggaaggaagacgttcctctatcctgcgtt
aacgagattgacacaactcctccaccccaggtggcctacagcaaggaacggatcccgggc
aagggtgttttcattaacacaggccctgaatttcttgtcggctgtgactgcaaagatggg
tgccgggacaagtccaagtgtgcctgccatcagctaactatccaggctactgcctgcacc
ccaggaggccaaatcaaccccaactctggctaccaatacaagagactagaagaatgtctg
cccacaggagtttatgagtgtaacaaacgctgcaaatgtgaccctaacatgtgcacaaac
cggttggtacagcatggcctgcaagttcgtctgcagctcttcaagacccagaacaagggc
tggggtatccgttgcttggatgatattgccaaaggctcctttgtctgtatttatgcaggg
aagatcctgacagatgactttgctgacaaggagggcctagaaatgggtgatgagtacttt
gccaatctggaccatattgagagcgtggagaacttcaaggaggggtatgagagtgatgcc
ccctgttcctctgacagcagtggtgtagacttgaaggaccaggaagatggcaacagcggt
acagaggaccccgaagagtccaatgacgacagctcagatgacaatttctgtaaggacgag
gacttcagcaccagctcggtgtggcgcagctatgctacccgacggcagacccggggccag
aaggagaatggattgtctgagatgtcttccaaggactctcgccccccagacctagggccc
ccacatattcctgtccctccatcaatccctgtaggtggctgcaatccaccttcctctgaa
gagacatctaagaacaaagtggcctcgtggttgagctgcaacagtatcagtgaaggtggc
tttgctgactctgatagccgttcatccttcaagactagtgaaggtggggaaggccgcact
gggggaggcagaggggaagctgagaaggcttccacctcagggctgggcttcaaggatgag
ggagacatcaagcaggccaagaaagaggaccctgatgaccgaaacaggatgtcgatagtt
actgaaagctctcgaaattacggttataatccttctcctgtgaagcctgaaggacttcgc
cgcccaccaagtaagactagtatgcatcagagccgaagactcgtggcctctgctcagcca
aaccctgatgatatcctgaccctgtccagcagcacagaaagtgagggggaaagtgggacc
agccggaagcccactgctggccagacttcagccgcagccatggacagtgatgatatccag
accatctcctctggctctgaaggggatgactttgaggacaagaagaacatgtctggtcca
atgaagcgccaagtggcagtaaaatccacccggggttttgctttgaaatcaacccatggg
attgccattaaatcaaccaacatggcatccgtggaaaagggggagagtgcacccgttcgt
aagaacacacgccagttctacgatggggaggagtcttgctacatcatcgatgccaagctt
gaaggcaacctgggccgctacctcaatcacagttgcagccccaacctgtttgtccagaat
gtcttcgtggatactcatgatctccgcttcccgtgggtggccttctttgccagcaagaga
atccgggctggcaccgagctcacctgggactacaactatgaggtgggcagcgtggagggc
aaggagctgctttgctgctgcggggcnnnnnnnnnntgccgagggcgtcttctttag

DBGET integrated database retrieval system