Pedobacter heparinus: Phep_0671
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Entry
Phep_0671 CDS
T00978
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phe01002
]
Phep_0671
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phe01011
]
Phep_0671
Peptidases and inhibitors [BR:
phe01002
]
Cysteine peptidases
Family C82
Phep_0671
Peptidoglycan biosynthesis and degradation proteins [BR:
phe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Phep_0671
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
ACU02893
UniProt:
C6Y1B7
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All DBs
Position
780581..781996
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AA seq
471 aa
AA seq
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MLLGISILLSCTVKRAVVNPPVSNQSSDPAPQKFAIKPDFPDFELEFKKILEQHSADLSY
PEVIEAFYQLHKLQPVLVRRFMAEGQLDTLLSRLEESAEHGLDPELFFTAGLKKMKNRLS
NKKAGNVLSKYRDTVELELNVASSLLKYSNALQFGLTDPLKIYKEYFAETARPDSTFMMQ
VLEHKELKGYLDSIQPKSGQYLALQAALKAQVQAQEKTISQTGELLKLNLERLRWKNRPP
GLKYVRVNIADFSLDVIDKGKLVLRMKVCVGEAARQTPQLSSMIYSVQVNPVWNIPESIA
RNEIIKYASRDKYYLANNSINVFKNGKRVWDLEAIDWGKAEPGSYSFKQRPGMKNSLGKI
KFLFKNESSVYLHDTPVKSAFNQKNRAISHGCVRVEKPLELAFVLFGKGPKYDQVKNAMQ
SGYPREKYIGLPTAIPISIAYYTALADQQGKVIFNKDIYGLDDMLAEELKK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggggatatcaattcttttgtcctgtaccgtaaagcgtgctgtcgtaaatccg
cctgtcagcaaccagtcgtcagacccggcgccccaaaagtttgcgataaaaccagatttt
cctgattttgagctggaatttaaaaagatactggagcagcattcagctgatttaagttac
cctgaagttattgaggccttttatcaactccacaagctacagcctgtgctggttcggcgc
tttatggctgaaggccagctggataccctgttgtccaggctggaagaatcggcagagcat
ggcctggatccggaacttttttttactgccggccttaaaaagatgaagaataggctgagc
aataaaaaagcggggaatgtattgagcaagtacagggacactgttgagctggaattgaat
gtggccagttcgctgttaaaatacagcaatgcgttgcagtttggccttactgatccactg
aagatttataaggaatattttgctgaaaccgccaggcctgatagcacttttatgatgcag
gtactggagcacaaagaacttaaaggttatctggacagcatacagccaaaatcggggcag
tatctggccttacaggcggctttaaaagcacaggtgcaagctcaggaaaagaccatatcc
caaacgggggaacttttaaagctgaacctggaacgcctgcggtggaaaaacagacctcca
ggcctaaagtatgttagggtcaacattgccgattttagcctggatgtgattgataagggg
aagctggtactgcgcatgaaggtttgtgtaggtgaggctgccaggcagaccccacagttg
agcagtatgatttacagcgtacaggtaaacccggtttggaacattcctgaaagtattgcc
cggaatgagattataaaatatgcttcccgtgataaatattacctggccaataacagcatc
aatgtattcaaaaatggtaagcgggtgtgggacctagaagcgatagactggggtaaggcc
gagccgggcagttactcttttaaacaaaggcccggaatgaaaaattcactgggaaagatc
aaatttctgtttaaaaacgaaagtagtgtttatttgcacgatacgcctgttaaatcagct
tttaaccaaaaaaacagggccataagccatggttgcgtaagggtagaaaagccattggag
ctcgcttttgtccttttcggtaaaggccccaaatatgatcaggtcaaaaatgccatgcaa
agtggttatccacgcgaaaaatatattggcctgccaacggccatccccatttccattgct
tattataccgcacttgctgatcagcagggaaaggtgatctttaacaaagatatttatgga
ttggatgatatgctggctgaagaacttaaaaaatga
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