Pedobacter heparinus: Phep_3425
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Entry
Phep_3425 CDS
T00978
Name
(GenBank) 3-isopropylmalate dehydratase, large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
phe
Pedobacter heparinus
Pathway
phe00290
Valine, leucine and isoleucine biosynthesis
phe00660
C5-Branched dibasic acid metabolism
phe01100
Metabolic pathways
phe01110
Biosynthesis of secondary metabolites
phe01210
2-Oxocarboxylic acid metabolism
phe01230
Biosynthesis of amino acids
Module
phe_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
phe_M00535
Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Phep_3425
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Phep_3425
Enzymes [BR:
phe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Phep_3425
4.2.1.35 (R)-2-methylmalate dehydratase
Phep_3425
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Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
ACU05619
UniProt:
C6XSQ6
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All DBs
Position
4079454..4080866
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AA seq
470 aa
AA seq
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MSKTLFDKVWDTHVVRKIEGGPDVLFIDRHLIHEVTSPVAFLGLKSRGIKVLYPERTFAT
ADHNTPTINQHLPVADPLSANQLKALESNSNEYGISHWGLGHQKNGIVHVVGPEYGITQP
GATIVCGDSHTSTHGAFGAIAFGIGTSEVEMVLSTQCIMQPKPKKMRINVNGKLGLGVTP
KDVALFIISQLSTSGATGYFVEYAGDVFENMTMEGRMTVCNLSIEMGARGGMIAPDETTI
NYVKGREFSPKGEAWDKALAYYKTLKTDADAVFDKELTFDGSKIEPMITYGTNPGMGMGI
SQDIPDAAQVEGGAETYAKSLNYMGFSEGDHMIGKKVDFVFVGSCTNGRIEDFRAFTSIV
KGKHKADDVTVWLVPGSHIVEAQIKEEGLLDILTEAGFTLRQPGCSACLAMNDDKIPAGK
YAVSTSNRNFEGRQGPGSRTMLASPLVAAAAAVTGVVTDPRTLIENEELV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacattatttgataaggtgtgggacactcacgtggtacgtaagattgaaggt
ggcccggatgtgctttttattgaccgccatctgattcacgaagtgaccagccctgtggcc
tttttaggtttaaaaagcaggggaataaaagtgttatatccggagcgtacttttgcaacg
gcagatcacaatacacctaccattaaccagcatttaccggttgcagatccgctttctgcc
aatcagttaaaagcactggagtcaaactccaatgaatatggcatcagccactggggattg
ggccatcaaaaaaatggcatagtgcacgttgtaggccctgaatatggcattacgcaacca
ggtgctaccattgtatgcggtgattcgcatacctctacccatggtgcttttggtgccatt
gcttttggtatcggtacttcagaggtagaaatggtgctttctacgcagtgcatcatgcag
cctaagcctaaaaaaatgcgcatcaacgtgaatggcaaactgggcttaggtgttacacct
aaagatgtagccctgttcatcatctctcagctaagtacttccggtgctacaggatatttt
gtagagtatgcaggtgatgtttttgagaacatgaccatggaagggcgcatgaccgtttgt
aatttaagtattgaaatgggtgcccgtggtggtatgattgccccggatgaaaccactatc
aattacgtaaaaggccgcgaatttagtccgaaaggcgaagcatgggataaagcactggct
tattacaaaaccttaaaaacggatgccgatgcggtatttgataaagagctgacctttgat
ggttcgaaaattgaacccatgatcacttacggtacgaacccaggtatgggaatgggtatt
tctcaggatatacctgatgctgcccaagttgaaggtggtgcagagacttatgccaaatcg
ttaaattatatgggtttctctgaaggggaccatatgattggtaaaaaagtagatttcgtt
tttgtgggtagctgtaccaatggccgcattgaagatttcagggcatttacttctattgta
aaaggcaaacacaaagcagatgatgttaccgtttggttggttcctggttctcatattgtg
gaagcacagattaaagaagaaggcttactggacattttaactgaggcaggctttacgctg
cgccagccaggttgctcggcttgtttggcaatgaacgacgacaagatccctgccggaaag
tatgcagtaagtacatcaaacagaaactttgaaggcagacaaggccctggttcaagaacc
atgctggccagtccgctggttgctgcagctgctgcggttaccggtgtggttacagacccg
agaaccctgattgagaacgaagaacttgtttaa
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