Pseudonocardia sp. HH130630-07: AFB00_11220
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Entry
AFB00_11220 CDS
T04486
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh00470
D-Amino acid metabolism
phh00550
Peptidoglycan biosynthesis
phh01100
Metabolic pathways
phh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AFB00_11220
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFB00_11220
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AFB00_11220
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phh01011
]
AFB00_11220
Enzymes [BR:
phh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AFB00_11220
Peptidoglycan biosynthesis and degradation proteins [BR:
phh01011
]
Precursor biosynthesis
Amino acid ligase
AFB00_11220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_4
ATP-grasp_3
GARS_A
DUF5926
CusF_Ec
Motif
Other DBs
NCBI-ProteinID:
ANY09978
UniProt:
A0A1B1ZW86
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All DBs
Position
complement(2307821..2308771)
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AA seq
316 aa
AA seq
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MSDRTVAVLAGGLSHEREVSLRSGRRLAGSLRANGVDVREWDVDGSLLERLRSDRPDVVA
VALHGGEGENGAVQQVLELLHLPFVGTPSGACRRAWDKPSVKAELVRAGLSTPDWVALPH
STFRELGAQGVLEAIVDRLGLPLVLKPDQGGSALGVQVVQSAADLPAAMVSSFAYADTVL
VERFVAGTEVAVSVVHDGADARALPPVEVEVSSGFYDYTSRYTPGAATFHCPARLPETVL
DLLAETALAAHRLLGLRDVSRMDAIVDGDGRVQILELNVSPGLTDTSLLPTAVDADGSDL
ATVYQALVERAATRSE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatcgaacggtggccgtgctggccggaggtctgtcccacgagcgcgaggtctcg
ctgcgatccggtcgccggctcgccgggtccctgcgggcgaacggcgtcgacgtgcgggag
tgggacgtcgacggctcgctgctcgaacgcctgcgctcggaccgtccggacgtggtcgcc
gtcgcgctgcacgggggcgagggggagaacggcgcggtccagcaggtgctggaactgctg
catctcccgttcgtcgggacgccgtccggtgcgtgccgccgggcgtgggacaagccgagc
gtcaaggcggaactggtccgtgccgggctcagcaccccggactgggtcgcgctgccgcac
tcgacgttccgcgagctcggcgcacagggcgtcctggaggcgatcgtcgaccggctcggg
ctgcccctggtcctgaagccggaccagggcggctccgctctcggtgtgcaggtcgtccag
agcgcggcggacctcccggccgccatggtgagcagcttcgcctacgccgacaccgtgctg
gtcgaacgattcgtcgcgggcaccgaggtcgccgtctccgtcgtgcacgacggcgccgac
gcccgcgcgctgcccccggtggaggtggaggtgtcgtccggcttctacgactacacctcc
cgctacacgccgggcgccgccaccttccactgcccggcgcggctcccggaaacggtgctg
gacctcctggccgagacggcactcgccgcacatcggctgctcgggctgcgcgacgtctcc
cggatggacgccatcgtcgacggggacgggcgcgtccagatcctggagttgaacgtgtcc
ccgggcctgaccgacacgtcgctgctgccgaccgccgtcgacgccgacggctcggatctg
gcgaccgtctaccaggcactggtggagcgggcggcgacgcgctcggagtga
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