Pseudopodoces humilis (Tibetan ground-tit): 102099426
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Entry
102099426 CDS
T02921
Symbol
DHX16
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102099426 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phi03041
]
102099426 (DHX16)
Spliceosome [BR:
phi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102099426 (DHX16)
Complex C
U4/U6.U5 tri-SnRNP related factors
102099426 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
nSTAND3
Flavi_DEAD
T2SSE
Motif
Other DBs
NCBI-GeneID:
102099426
NCBI-ProteinID:
XP_014117674
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MAALERWVSGQLQELLGLSARHVPAFLVALARRSRSPEELLERLRETEALRVEEPRVREF
ASQLWDKVPREAPREPPGRAAERAALELQRQNRGYRLVESDEEGPGPAQDHAQDEPRPRR
RHLRRRRRSESPPEAPAASPPPPPAGEAPEEPEEEWEASERERLRDLRERDAFAERLRRR
DRDRGARGDSKIPELRKRSRREYLAKREREKLEELELEIEDEERLFGEETLSAAELRELR
YKRSLRDLARDYKRAGEREQLERSGRYHIPEETRDGRQSLQDSRRSLPIFPFRQELLAAV
AQHQILVIEGETGSGKTTQIPQYLHEEGYTRGGMKIGVTQPRRVAAMSVAARVAVEMGTK
LGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVIMVDEAHERTLHTDVL
FGLIKDIARFRPRLKVLVASATLDTERFSAFFEHAPVFRIPGRRFPVDIYYTKAPEADYL
EACVVSVLQIHVTQPPGDILVFLTGQEEIEACVELLQERCRRLGSRLPELLVLPIYANLP
SELQARIFQPTPPGARKVRWPFKGGRGVGRRAGLTPRTGMESLVGTPCSRASANQRAGRA
GRVAPGKCFRLYTAWAFQHELEETAVPEIQRADLGSLVLLLKSLGINDLIHFDFLDPPPH
ETLVLALEQLYALGALNHLGELTTLGRRMAELPVEPMLAKMILASEQYGCTEEVLTVAAM
LSVNNAVFYRPKDKVLHADSARAAFGVPGGDHLVLLNVYNQWVLSGHSLQWCYEHFVQAR
SLRRARDVRDQLQGLMERVEIAPSSCGGNLDLVRKAITAGFFYHTARLARGGYRTVKHQQ
PVFIHPNSALFSLQPRWVLYHELVCTSKEFMRQVMEIDSTWLLEVAPHYYQAKELEDGSG
RKMPKKTGKTREELG
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctggagcgctgggtgtccgggcagctgcaggagctgctgggcctcagcgcc
cgccacgtccccgcgttcctggtggcgctggcgcggcgcagccgcagcccggaggagctg
ctggagcggctgcgcgagaccgaggccctgcgcgtggaggagccgcgcgtgcgcgagttc
gcgagccagctgtgggacaaggtgccgcgggaagccccccgggagccccccgggcgcgcg
gccgagcgagcggcgctggagctgcagcggcagaaccgcggctaccgattggtggagagc
gacgaggaggggccgggccccgcccaggaccacgcccaggacgagccacgcccccggcgg
cgccacctgaggcgacggcgccgctccgagtccccccccgaggcccccgcggcgtccccg
ccgcccccaccagccggcgaggcccccgaggagccggaggaggagtgggaggcgtcggag
cgggagcggctgcgggacctgcgggaacgcgacgccttcgccgagcggctgcggcgccgc
gaccgcgaccggggcgcccgcggggacagcaagatccccgagctgcggaagcgctcccgc
cgggagtacctggccaagcgtgagcgggagaagctggaggagctggagctggagatcgag
gacgaggagcggctgttcggggaggagacgctgagcgcggccgagctgcgcgagctgcgc
tacaaacggagcctgcgtgacctcgcccgcgactacaaacgggccggggagagggagcag
ctggagaggagcggcagatatcacatccccgaggagacacgggacgggcggcagtctctc
caggacagccgccgctcgctgcccatcttcccgttccgccaggagctgctggcggccgtg
gcccagcaccagatcctcgtcatcgagggggaaacggggtcggggaaaaccacccagatc
ccccagtacctgcacgaggagggctacacgaggggggggatgaagatcggggtgacgcag
ccgcggcgcgtggccgccatgagcgtggcagccagggtggccgtggagatggggacaaag
ctgggcaacgaggtggggtacagcatccgtttcgaggactgcacgtcggagcgcacggtg
ctcaagtacatgacggacgggatgctgctgagagagttcctgacagagcctgacctggcc
tcctacagcgtgatcatggtggacgaggcgcacgagcgcacgctgcacacggacgtgctc
ttcggcctcatcaaggacatcgcgcgcttccggccgcgcctcaaggtgctggtggcgtcg
gccacgctggacacggagcgcttctccgccttcttcgagcacgcgcccgtcttcaggatc
cccgggagacgcttccccgtcgacatctactacaccaaggcccccgaggccgattacctg
gaggcctgtgtggtgtcggtgctgcagatccacgtcacccaaccccctggggacatcctg
gtgttcctcaccggccaggaggagatcgaggcgtgcgtggagctgctgcaggagcgctgt
cgccgcctgggctcgcggctgccggagctgctggtgctgcccatctacgccaacctcccc
tcggagctgcaggcgcgcatcttccagcccacgccccccggcgccaggaaggtgcgctgg
ccctttaagggagggcggggcgtcgggaggagggcggggcttaccccccgcaccggcatg
gagtcactggtggggacaccctgctccagggcctcagccaatcagcgcgcaggccgcgcc
ggccgcgtggctcccgggaaatgtttccgtctctacacggcctgggcgttccagcacgag
ctggaggagacggcggtgcccgagatccagagagccgacctgggatcactggtgctgctc
ctcaagagcctggggatcaacgacctgatccactttgatttcctggacccgcccccccac
gagacgctggtgctggcgctggagcagctctacgccctgggggccctgaaccacctgggg
gagctcaccacgctgggccggcgcatggcggagctgccggtggagccgatgttggccaag
atgatcctggcgagcgaacagtacggctgtacggaggaggtgctgacggtggccgccatg
ctctcggtgaacaacgccgtgttttaccggcccaaggacaaagtgctccacgccgacagc
gcccgcgccgccttcggggtccccggcggggatcacctggtgctgctcaacgtctacaac
cagtgggtgttgagcggtcactccctgcagtggtgttacgagcactttgtccaggcgcgt
tccctgcgccgcgcccgcgacgtgcgggaccagctgcaggggctgatggagcgcgtggag
atcgcgccgagctcctgcgggggcaacctggacctggtgcgcaaggccatcaccgccggg
tttttctaccacacggcgcgtttggcgcggggcgggtaccgcacggtgaagcaccaacag
ccggtgttcatccaccccaacagcgccctgttctcgctacagccccgctgggtgctgtac
cacgagctggtgtgcacctccaaggagttcatgagacaggtgatggagatcgacagtacc
tggctgctggaggtggcccctcactattaccaggccaaggagctcgaggacggcagcggc
cgcaagatgccaaaaaaaaccgggaaaacgcgggaggagctgggctga
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