Pseudopodoces humilis (Tibetan ground-tit): 102100942
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Entry
102100942 CDS
T02921
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102100942 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phi03400
]
102100942 (APEX1)
Enzymes [BR:
phi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
102100942 (APEX1)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
102100942 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
102100942
NCBI-ProteinID:
XP_005533992
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MPKRGKKKEESGSGDEAGPGPAKVAKVAKAPPAPLYEDPPTREATPEGRRWTLKVSSWNV
DGLRAWVRKGGAQWVQEEAPDVLCLQETKCAVSAVPAEIRALPGLPHQFWSSAKDRPGYS
GVGLLAKTEPLNVTYGIGDPEHDVDGRVVTAEFPSLFVVSAYVPNAGRGLVRLEPRLRFD
AAFLSFLRRLDERKPVLLCGDLNVAHCEIDLCHPRVNRANPGFTPQEREGFSRLLAAGFV
DSFRHLYPEARGAFTFWTYLGGARARNVGWRLDYAVLSRRLLGALCDCKIRSTVPGSDHC
PITALLAV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgcgggaagaagaaggaggagagcggcagcggggacgaggccggacccggc
cctgccaaggtggccaaggtggccaaggcgccgccggccccgctgtacgaggacccgccc
acccgcgaggccacgcccgagggccggcgctggacgctcaaggtctcctcctggaacgtg
gacgggctgcgggcctgggtgcgcaagggcggggcccagtgggtgcaggaggaggccccg
gacgtgctgtgcctgcaggagaccaaatgcgccgtctcggccgtgcccgccgagatccgg
gcgctgccggggctcccgcaccagttctggtccagcgccaaggaccggccgggctacagc
ggcgtggggctgctggccaagactgagcccctcaatgtcacctacggcatcggcgacccc
gagcacgacgtcgacggccgcgtggtcacggccgagttcccgtcgctcttcgtggtgtcg
gcctacgtgcccaacgcgggccggggcctggtgcggctggagccgcggctgcgcttcgac
gccgccttcctgtccttcctgcggcgcctggacgagcgcaagccggtgctgctgtgcggc
gacctcaacgtggcgcactgcgagattgacctgtgccacccccgcgtcaaccgcgccaac
cccggcttcacgccgcaggagcgcgagggcttctcccgcctgctggccgccggcttcgtc
gactccttccgccacctgtaccccgaggcgcgcggcgccttcaccttctggacctacctg
ggcggcgcgcgggcccgcaacgtgggctggcggctggactacgccgtgctgtcgcggcgg
ctgctgggcgcgctctgcgactgcaagatccgcagcaccgtgccgggcagtgaccactgc
cccatcaccgccctgctggccgtctag
DBGET
integrated database retrieval system
