Pseudopodoces humilis (Tibetan ground-tit): 102106138
Help
Entry
102106138 CDS
T02921
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102106138 (TARDBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102106138 (TARDBP)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102106138 (TARDBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
TDP43_N
RRM_1
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102106138
NCBI-ProteinID:
XP_005530526
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPEAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFAQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSSRQLERGGRFGGNPGGFGNQGGFGNSRGGGGGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQPQGNMQ
REQNQGFSSGNNSYGGSNSGAAIGWGSASNTGSSSGFNGGFGSSMDSKSSGWGM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtatatccgggtgacggaggacgagaacgatgagcccatcgaaatcccatcg
gaggacgacggcacggttctgttgtccacggtgacggcgcagttccccggggcgtgcggg
ctgcgttaccggaacccggtgtcgcagtgcatgcggggagtccggctggtcgagggcatc
ctgcacgcccccgaggccggctggggaaacctagtctacgtcgtgaattaccccaaagat
aataagagaaaaatggatgaaaccgatgcgtcatcagctgtgaaagtgaagcgagcagta
cagaagacttcagatttaatagtcctgggtcttccctggaaaaccactgaacaagactta
aaggaatatttcagtacctttggagaagttctgatggtgcaggttaagaaggatattaaa
accggccattcaaaaggttttgggtttgttcggttcacggattatgaaacccaagtgaaa
gtaatgtctcagcggcacatgatcgatggaagatggtgtgactgtaaacttcccaactct
aagcaaagtccggatgaacctttgcgcagcaggaaggtgtttgttggacgctgcactgag
gacatgacggcagatgaactccgacagttctttgcccagtatggggaagtggtagatgtc
ttcattcctaaacccttccgagcttttgcttttgttacatttgcagatgatcaggttgcc
cagtctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcacaatagcagtagacaactagagagaggtggaagatttggtggtaacccg
ggaggctttgggaatcagggtgggtttggtaacagcagaggaggtgggggaggactgggc
aacaaccagggcagcaatatgggcgggggtatgaactttggggcctttagcatcaaccct
gccatgatggcagcggctcaggcggccctgcagagcagctgggggatgatgggcatgctg
gccagccagcagaaccagtctgggccctcgggaaacaaccagcctcaaggcaacatgcag
cgggaacagaaccagggttttagttcaggcaacaactcgtacggagggtccaactcgggg
gcagcgataggctggggctcggcctcaaacacaggctccagcagtgggtttaatggaggc
tttggttcaagcatggattctaagtcatcaggctggggaatgtag
DBGET
integrated database retrieval system
