Pseudopodoces humilis (Tibetan ground-tit): 102107642
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Entry
102107642 CDS
T02921
Gene name
SMO
Definition
(RefSeq) smoothened, frizzled class receptor
KO
K06226
smoothened
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102107642 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
phi04030
]
102107642 (SMO)
G protein-coupled receptors [BR:
phi04030
]
Frizzled / Smoothened family
102107642 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Dicty_CAR
Fz
Motif
Other DBs
NCBI-GeneID:
102107642
NCBI-ProteinID:
XP_005533134
LinkDB
All DBs
Position
Un
AA seq
676 aa
AA seq
DB search
MPKCEDGQVELPSQTLCQATRTPCIIVERERGWPDFLKCTTDRFPEGCPNEVQNIKFNSS
GQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEKEHREMHVYIAAFSSVTIFCTFFTLA
TFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGAREEIVCRADGTMRLGEPTSNE
TLSCVIIFVIVYYSLMSGVIWFVMLTYAWHTSFKALGTTYQPLLGKTSYFHLITWSIPFV
LTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIK
SNHPGLLSEKAASKINETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREYVLC
EANVTIATQTNKPIPDCEIKNRPSLLVEKINLFAMFGTGVSMSTWVWTKATLLIWKRTWC
RLTGQSDDQPKRIKKSKMIAKAFSKRKELLRDPGRELSFSLHTVSHDGPVAGLAFNINEP
SADVSSAWAQHVTKMVARRGAILPQDISVTPVATPVPPEERANLWVVEADVSPELQKRGG
HKKKRRKKKKKKEVNPDPERCLGGSSVPRLPRLPPQPCLVAFAPDVQPDAAFPGAPWAGQ
SRRAEVLHVISNPFCPESGAEESPGAGRWQHNGGSPWPPQPWPGPARTQGRRAGLAPIHS
RTNLVDAELLEPDSDF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtgcgaggatgggcaggtggagctgcccagccagaccctctgccaggccacc
cggactccctgcatcatcgtggagcgcgagcgcggctggcccgacttcctcaagtgcacc
accgaccgcttccccgagggctgcccgaacgaggtgcagaacatcaagttcaacagctcg
gggcagtgcgaggcaccgctggtgaggacagacaaccccaagagctggtacgaggacgtg
gagggctgcggcatccagtgccagaacccgctcttcaccgagaaggagcaccgcgagatg
cacgtctacatcgccgccttcagctccgtcaccatcttctgcaccttcttcaccctggcc
acgtttgtcgctgactggaggaactccaaccgctaccccgccgtcatcctgttctacgtc
aacgcctgcttcttcgtgggcagcatcgggtggctggcgcagttcatggacggcgcccgc
gaggagatcgtgtgccgggccgacggcaccatgaggctgggcgagcccacctccaacgag
acgctgtcctgcgtcatcatcttcgtcatcgtctactactcgctgatgtcgggtgtcatc
tggttcgtcatgctcacctacgcctggcacacctccttcaaagccctgggcaccacctac
cagccactgctgggcaagacctcctacttccacctcatcacctggtccatccccttcgtg
ctcaccgtggccatcctggccgtggcgcaggtggatggtgactctgtcagtggcatctgc
ttcgtgggctacaagaattaccgctaccgagccggcttcgtgctggcccccatcgggctg
gtgctcatcgtgggcggctatttcctcatccggggggtcatgacgctcttctccatcaag
agcaaccaccccgggctgctgagcgagaaggcggccagcaagatcaacgagaccatgctg
cgcctgggcatcttcggcttcttggccttcggcttcgtcttcatcacctttggctgccac
ttctacgacttcttcaaccaggccgagtgggagcgcagcttccgggagtacgtcctgtgc
gaggccaacgtgaccatcgccacgcagaccaacaagcccatcccggactgcgagatcaag
aaccggcccagcctcctggtggaaaagatcaacctcttcgccatgtttggcaccggtgtc
tccatgagcacctgggtctggaccaaggccaccctgctcatctggaagcgcacctggtgc
aggctgacggggcagagcgatgaccagcccaagaggatcaagaagagcaagatgatcgcc
aaggccttctccaagcgcaaggagctgctgcgcgacccaggccgggagctgtccttcagc
ctgcacaccgtgtcccacgacggccccgtggccggtttggccttcaacatcaacgagccg
tcggccgacgtgtcctcggcgtgggcccagcacgtcaccaagatggtggccaggagaggg
gcgatcctgccccaggacatctccgtgacgcccgtggcgacacctgtgccgccggaggag
agagccaacctgtgggtggtggaggccgacgtgtccccggagctgcagaagcgcggcggt
cacaagaagaagcggaggaagaagaagaagaagaaggaggtgaacccagaccctgagcgc
tgcctggggggctcctccgtccctcgcctgcctcgcctgcccccccagccctgcctggtg
gcttttgcccccgatgtccagcccgacgccgccttccccggggcgccgtgggccgggcag
agccgcagagccgaggtcttgcacgtgatcagcaaccccttctgccccgagagcggcgcc
gaggagagccccggtgccgggcgctggcagcacaacgggggctccccgtggccaccacag
ccctggccagggccagccaggactcagggccgccgggcagggctggcccccatccactct
cggaccaacctggtggacgcggagctgctggagcccgactcggacttctga
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