Pseudopodoces humilis (Tibetan ground-tit): 102109093
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Entry
102109093 CDS
T02921
Name
(RefSeq) antigen peptide transporter 1-like
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi02010
ABC transporters
phi04145
Phagosome
phi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102109093
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102109093
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102109093
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phi02000
]
102109093
Enzymes [BR:
phi01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
102109093
Transporters [BR:
phi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
102109093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
nSTAND1
Motif
Other DBs
NCBI-GeneID:
102109093
NCBI-ProteinID:
XP_005533878
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MLSPPTCRLLALLGPERGRWMLVGGLMSASALGEVAAPYFTGQVTDQVTQKDATAAVWPL
VLLGLSSAITELACDSLAAVALTRARDRLQRGAVAAVLRGDVPGPGGSLGDTPGAVAERV
TGDSEAAHSALADVLVPGLWALTRAGSLLAMVAWLSPVLGLLTLLALPLLLLLPHAVGCI
QQDLARQVRMAQAGTTALALESLGAIGTIRAFGHEAGVTTRVRQRLAQGHQLEQREALAY
AAGCWASGFPALALKLVLLLLGGYLVAAGTVTPGDLVTILMCQLHFITAAKGVLHYFPIL
AKAVGSSETLLELLEQARMVAPAGPPSPVTPQGHETTWTQGLCLKDVWMSYPGRSEPVLK
GVSLSLRPGEVVAVLAPPGGGKSSLVSAALGLRPLAGGAVLLNGIPLTPSSDPALRQQVA
GVLQRLSLLSRSLSANITLGWGHKEGTEVMAAAQRVGVHTWAKQLPHGYDTEVGPRGMQL
SGGQAQGVALARALLRNPQVLVLDEPTQALDPMTQRQVEQELLCPGAPGAGERPAVLLVT
GRVALAQRAPRVALLERGRLRELGTPGELRTLPWGTAGDTGDPGDGEGDD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctccccccacatgccggctcctggccctgttgggccccgagcgcgggcgctgg
atgctggtgggggggctgatgtcggcttctgccctcggtgaggtggctgccccatacttc
acaggacaagtcaccgaccaggtgacacagaaggatgcaacagcggccgtgtggcccctt
gtgctgctggggctcagcagtgccatcaccgagctggcctgtgacagcctggcagctgtg
gcgctgacccgggcgcgggaccggctccagcgcggtgcggtggctgcagtgctgcgtggg
gacgtgcccgggccggggggcagcctgggggacactccaggcgcggtggccgagcgggtg
acaggggactctgaggcggcgcactcagcgctggccgatgtgctggtgccggggctgtgg
gcgttgacacgggctgggtcactgctagccatggtggcctggctgtccccggtgctgggc
ctgctcacccttctggcgctgcccctcctcctgctgctgccacacgccgtcgggtgcatc
caacaggatctggcacggcaggtgcggatggcacaggccggcaccactgcactggccctg
gagtcactgggggccatagggaccatccgggccttcgggcacgaggccggtgtcaccacg
cgcgtccggcagcgcctcgcccagggacatcagttggagcagagggaggcgctggcctat
gcggctggctgctgggccagtgggttccctgcattggccctgaagttggtgctcctcctc
ttggggggatacttggtggctgcagggactgtcacccctggggatctggtcaccatcctc
atgtgccagctgcacttcatcaccgctgcgaagggtgtgctccactacttcccgatcctg
gccaaggccgttggctcctctgagacactcctggaactgctggagcaggccaggatggtg
gcacccgcagggccaccgtcacctgtcaccccccagggccatgagaccacatggactcag
ggtctgtgcctcaaggatgtctggatgtcataccctgggcggtccgagccagtcctcaag
ggggtgtcgctgtcactgcgccccggggaggtcgtggccgtgctggcgccccctggtggc
gggaagagctcgctggtgtcagcggcactgggactgcgccccctggcggggggggcggtg
ctgctcaacgggattcccctgacccccagctcggaccctgctctgcgacaacaggttgct
ggtgtcctgcagcgcctgtccctcttgtctcgctctctcagcgccaacatcacactgggc
tggggccacaaggaggggacagaggtgatggcagcagcacagcgggtgggggtgcacact
tgggccaagcagctgccacatggctatgacacagaggtgggcccacgggggatgcagctt
tcaggggggcaggcacaaggagtggcgctggcccgggccctgctcaggaacccccaagtg
ctggtgctggatgagcccacgcaggcactcgaccccatgacccagcgccaggtggagcag
gagctgctgtgtcccggcgctcctggggcaggggagaggccggcagtgcttctggtgaca
gggcgggtggccctggcccaacgggctccgagggtggccctgctggagaggggacggctg
cgggagctggggacccccggggagctaaggaccctcccgtgggggacagcgggggacact
ggagaccctggggatggggagggggacgactag
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