Pseudopodoces humilis (Tibetan ground-tit): 102109362
Help
Entry
102109362 CDS
T02921
Symbol
PAPD5
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102109362 (PAPD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102109362 (PAPD5)
03016 Transfer RNA biogenesis [BR:
phi03016
]
102109362 (PAPD5)
Enzymes [BR:
phi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
102109362 (PAPD5)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
102109362 (PAPD5)
Transfer RNA biogenesis [BR:
phi03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
102109362 (PAPD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
102109362
NCBI-ProteinID:
XP_014111013
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MSPRPEEERMRMEVVNRIENVIKELWPNADVQIFGSFKTGLYLPTSDIDLVVFGKWETLP
LWTLEEALRKHNVADENSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVKAAQLIKDF
IKKYPVLPFLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACMPNANYG
VLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKSMLDGYRPSMLYIEDPLQPGNDV
GRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNETESILGRIIRVTQEVATYRDWISK
QWGMQSRTESSCNGNGVTLIVDTQQLDKCNNNLAEENEALGKPRNKTSETLSKHSSNSSS
GPLSSSSSTLSSSSDVDSDGTPCKTSKQLSCRQSTTNRVGSQEVSLESSQSSGKTQNSQT
ANTSSNTNKSQHGSARLFRSSNKGFQGPANSSHGTSVTNKQHQGSKSHHQFFHGKKRKHK
RDAALSDLCR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccagacctgaagaagagagaatgcggatggaagtggtgaacagaatagaaaat
gttatcaaggagctctggcctaatgcagatgtgcagatatttggaagttttaaaactggt
ttatatttacctacaagtgatattgatttagttgtgtttggaaaatgggagacattacct
ctttggaccctggaagaagctcttagaaagcacaatgtagcagatgaaaactcagtaaag
gttttagataaagcaactgtacctattattaaactgacagattccttcactgaagtaaaa
gttgatataagctttaatgtacagaatggggttaaagcagcccagctcatcaaagatttt
atcaagaaatatcctgtgttaccatttctagttttagtactgaaacagttcctgttgcag
agggaccttaatgaagtatttacaggtggaattggttcttatagtctctttttaatggct
gttagtttccttcagctacatcccagggaagatgcctgtatgcccaatgccaactatggt
gttcttttaatagagttttttgaattatatggacgtcacttcaattatctgaagactgga
atccgaataaaagatggtggctcttatgttgccaaggatgaagtgcagaaaagcatgttg
gatggctacagaccatcaatgctgtacattgaggatccattacagccaggtaatgatgtt
gggaggagttcctatggtgccatgcaagtgaagcaggcttttgattatgcctatgttgtt
ctgagccatgcggtttccccaatagctaaatattatcctaacaacgaaacagaaagtata
ttagggagaataattagagtaacacaagaagtggccacgtacagagactggatatccaag
cagtggggaatgcaaagcagaacggaatcttcatgtaatggtaatggagtaaccttgata
gtagatactcagcagctggacaaatgcaacaataatcttgctgaagagaatgaagcactg
ggaaaacctagaaataaaacttcagaaacacttagtaaacattcttcaaattcttcatca
ggtcctttatcatcatcatcatccacactgtccagctctagtgatgtagattctgatgga
acaccttgcaaaacctctaaacagttgagttgtcgtcagtctaccacaaacagagtgggg
tcacaagaagtgtcactggaatcctcccagtcaagtgggaaaacacaaaatagccaaaca
gccaatacatccagcaacacgaacaaatctcagcatggatctgcacggttatttcgctct
tctaacaaaggcttccaaggtccagcaaactcaagccatggtacctcagtcacaaacaaa
cagcaccaaggcagcaaatcacaccatcagtttttccacggcaaaaagaggaaacacaag
agggatgcagccctgtcagacctttgtagatag
DBGET
integrated database retrieval system
