Pseudopodoces humilis (Tibetan ground-tit): 102113274
Help
Entry
102113274 CDS
T02921
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102113274 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phi00536
]
102113274 (COL3A1)
Glycosaminoglycan binding proteins [BR:
phi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102113274 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
102113274
NCBI-ProteinID:
XP_014114547
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MMSFVQKVTLLILAVFQPSVILAQQVVTGCTHLGQAYADRDVWKPEPCQICVCDSGSVLC
DDIICDDQELDCPNPEIPFGECCPVCPQTTTPPPRTPGVVSRGPKGDPGSPGIPGRNGPP
GPPGQPGSPGAPGPPGICQSCPSISGGSFSPQYDSYDVKAGGAGLGYPQAISGFPGPPGP
SGPPGPPGHAGPPGSAGYQGSPGEPGQPGPPGPPGPVGMIGPVGPPGKDGEPGRPGRNGD
RGIPGLPGHKGHPGMPGMPGMKGQRGFDGKDGAKGDSGAPGPKGETGLPGVNGAPGQPGP
RGPAGERGRPGNPGGPGAHGKDGSPGAAGPPGPPGPPGTAGFPGSPGFKGEAGPPGPAGV
SGSPGERGEPGPQGHAGPPGPQGPPGRAGSPGNKGEMGPSGIPGAPGLPGGRGLPGPPGA
SGNPGAKGSPGDPGKDGAKGEPGPKGERGENGTPGAPGPPGEEGKRGANGEPGQNGVPGT
PGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGERGQDGGPGLPGMRGLPGI
PGSPGSDGKPGPPGNQGESGRSGPPGPPGPRGQPGVMGFPGPKGNEGAPGKNGERGPGGP
PGPPGLAGKNGDVGLPGPPGPTGASGERGEPGAAGPPGLQGLPGGPGPAGENGKPGEPGP
KGDIGGPGFPGPKGENGIPGERGAQGPPGPPGTRGGPGPAGTEGAKGPPGPPGPPGGTGL
PGLQGMPGERGASGSPGPKGERGEPGGKGADGLPGARGERGNVGPIGPPGPAGPPGDKGE
TGPAGAPGPMGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGEAGPPGA
AGPQGGPGAPGPPGPQGIKGDRGSPGGPGAAGFPGARGLPGPPGNNGSPGPPGNAGPAGK
DGPPGPPGSSGAPGGPGPAGIRGEPGTPGEKGPPGARGERGAPGEPGPQGIVGGRGNTGL
PGLRGPSGPPGMAGAKGEDGKPGTNGIPGERGAPGPQGPIGQRGLPGEPGRDGNPGSDGL
PGRDGSPGGKGDRGESGSPGPPGPPGHPGPAGNAGAPGKSGERGFQGPPGPPGSTGPAGA
RGPAGPQGPRGDKGEPGERGSTGIKGHRGFPGTPGLPGPPGPLGPQGAIGGPGASGARGP
PGPAGPPGKDGTSGYPGPIGPPGPRGSRGESGPAGPPGQPGLPGPSGPPGPCCGGGVAAL
GAGEKGPVSYGYEYRDEPKENDINLSDIISSMKSINNQIENIISPDGSRKNPARNCRDLK
FCHPELKSGEYWIDPNQGCKMDAIKVYCNMETGETCLNANPRTVPRKNWWTSANSGKKHI
WFGESMNGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYMDHDSGNV
KKALKLMSSTESEIKAEGNSKFTYAVLEDGCTKHTGEWGKTVFEYRTRKTMRLPVVDIAP
LDIGGPDQEFGVDIGPVCFL
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaagtaactttgctcattcttgccgtgtttcaaccctcagtt
attttggcacaacaagtcgtcacgggatgtacccatcttgggcaggcttatgctgacagg
gatgtttggaaaccagagccatgccaaatctgcgtgtgcgactcaggatctgttctctgt
gatgacatcatctgtgatgatcaggagctggactgccccaacccagagattccttttgga
gagtgctgtccagtttgtccacaaacaacaacgccacctccaagaactcctggagtagtc
agccgaggccccaaaggagaccctggttctcctggaattccaggcagaaatggtccccct
ggcccaccaggacagccagggagccctggagctcctgggccccctggaatctgccagtca
tgtcccagtataagtggaggtagtttttctccacagtatgactcctatgatgtgaaggca
ggtggagctggtctcgggtacccacaagccattagtggctttccaggaccccctggcccc
agtggcccccctggcccacctggtcatgcaggtccccctggctctgctggataccagggc
tcccctggagaaccaggacaacctggccctcccggacctccaggacccgttggaatgata
ggcccagttggtccaccaggaaaagatggagaaccaggaagaccaggcaggaatggagac
cgtggaatccctgggttaccgggtcacaagggacaccctggaatgcctgggatgcctggg
atgaaaggccagcgaggttttgatggaaaagatggtgccaaaggtgacagtggtgctcct
ggtccaaagggtgaaaccggtcttcctggagtaaatggagcaccgggccaaccgggacca
agaggtccagctggagaaagaggaagacctgggaatcctggtggccctggtgcccacggc
aaagacggatctccaggagcagcaggcccacctggtcccccaggtccccctggaaccgca
ggatttccaggttctccaggttttaagggtgaagctggtcctcctggtcctgctggtgtt
agtggtagtcctggagagagaggagaacctggtcctcagggtcatgctgggccacctggg
cctcagggccctcctggaagagctggaagccctggcaacaagggtgaaatgggaccatct
ggtattcctggtgctcctgggctgccaggaggccgtggtcttccaggtcctccaggtgca
agtggaaatcctggggcgaaaggcagtccgggagaccctggtaaggatggtgcaaaagga
gagccaggaccaaaaggtgaacgtggtgaaaatggtaccccaggtgctcctgggcctcct
ggtgaggaagggaaaagaggtgcaaatggtgaacccgggcagaacggagtacctggtacc
cctggagaaaggggctcccctggcttccgtggcttacccggtagcaatggacttccagga
gaaaagggtcctgcaggagaacgtggcagcccaggtccccctggccccagcggaccggca
ggagagcgtggacaagacggaggcccaggtcttcctggaatgagaggcttgcccggaatt
ccaggaagccctggaagtgatgggaaacctggccctcccggcaaccagggtgaatctgga
cgctctggcccacctggccctccaggcccacgtggccagccaggtgtgatgggtttccct
ggtcctaagggcaatgagggggcaccaggcaagaacggagaaagaggccctggtggacca
cctggaccacctggtcttgctgggaagaatggtgatgttggccttccaggtcctccagga
cctactggtgcttctggggagagaggagaaccaggagcagcaggcccacctggcctccag
ggattgcctggtggaccaggaccagctggagaaaatggaaagcctggagagccagggcca
aaaggtgatattggaggacctggattcccaggccctaagggtgaaaatggtatcccagga
gaacgtggagcacaaggtcctccaggacctcctggaacacgaggtggaccgggtcctgct
ggcacagaaggtgccaagggtcctcctggcccacctggcccccctggaggcacaggactg
cctggcttacagggaatgccaggagaaagaggagcttctggaagccctggaccaaaaggg
gagaggggagaacctggtggtaaaggtgctgatggccttcctggtgcaagaggagagaga
ggcaatgtaggtcccatcggtcctcctggtcctgccggcccacctggagataagggagag
actggcccagcaggtgcccctggcccaatgggttcccgtggaggtcctggtgaacgagga
gaacaaggtcttcctgggcctgctggcttccctggagccccaggccaaaatggggaacct
ggtgggaaaggagaaagaggcccccctggtctaagaggagaggccggaccccctggagca
gcaggtccacagggcggccctggtgccccaggtccacctggtccccaaggaataaaagga
gaccgtggatctcctggtgggcctggtgctgctggtttccctggtgcccgtggtctacct
ggtccccctggtaacaatggtagcccgggtcctcctggtaacgcagggcctgcaggcaag
gatgggcctcccggaccccctggtagttctggtgctcctggaggtccaggacctgctgga
atcagaggtgagcccggcacaccaggagaaaaagggcccccaggagcacgaggagaaagg
ggggcaccaggtgagccaggtcctcaaggcatcgttggcggccggggaaacacgggtctg
ccaggccttcgtggccccagtggcccacccgggatggcaggagccaagggtgaagatggc
aagccaggcaccaacggtatcccaggagaacgcggtgctcctggtccccaaggccctatt
ggacaaagaggtttacctggagagcccggcagagatggtaaccctggctccgacggcttg
cctggacgtgatggatccccaggaggcaaaggtgaccgtggtgaaagtggctctcctggc
cctccaggaccccctggccaccctggacctgcaggtaatgctggtgcacctggaaaatct
ggtgaaagaggatttcagggtccacctggcccccctggctctactggtcctgctggtgct
cgtggtcctgccggtcctcaaggccctcgtggtgataaaggtgaacctggtgaacgaggc
agcactggcataaagggtcacagagggtttcctggtacccccggtctccctggtcctcct
ggtcccctgggtccacaaggtgcaattggaggtccaggagcttcaggtgcaaggggcccc
ccaggaccagctgggccacctggaaaagatggtaccagtggctacccaggtccaattggt
ccccctggtccccgtggcagcagaggtgaaagcggccctgccggtccaccagggcagcct
ggtcttcctggtccttctggtcctcctggtccatgttgtggtggtggtgtagctgccctg
ggtgctggtgagaaaggtccagtttcctacgggtatgaataccgagatgagcccaaggaa
aacgacatcaatctgagtgacatcatatcttcaatgaaatcaattaacaaccagattgaa
aacatcattagtcccgatgggtcccggaagaacccagctcgtaactgccgagacctgaaa
ttctgccatcctgagctcaagagtggagagtactggattgatcctaaccaaggctgcaag
atggatgctattaaagtctactgcaatatggaaactggtgagacctgcctcaatgctaac
cccaggactgtcccaaggaaaaactggtggaccagtgcgaacagtggaaagaaacacatt
tggtttggagagtccatgaatggaggcttccagttcagctatggagatcctgagcttcca
gaggatgtctccgaagttcagctggccttcctgcgcatcctctccagccgtgcctcccag
aacatcacctaccactgcaagaacagcattgcctacatggaccacgacagtgggaatgtt
aaaaaagctctgaaactgatgagctctacagaaagtgagatcaaggctgaaggaaacagc
aaattcacatatgctgttctggaagatggctgcactaaacacactggtgagtggggtaaa
acagttttcgaatacaggacgcgcaagacaatgaggttgccagtggttgatattgcacca
ttagatattggtggtcctgatcaggaatttggcgtggacattggcccagtctgcttttta
taa
DBGET
integrated database retrieval system
