Pelagibacterium halotolerans: KKY_2456
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Entry
KKY_2456 CDS
T01645
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
phl
Pelagibacterium halotolerans
Pathway
phl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KKY_2456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phl03400
]
KKY_2456
Enzymes [BR:
phl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KKY_2456
DNA repair and recombination proteins [BR:
phl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KKY_2456
RecFOR pathway proteins
KKY_2456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_22
AAA_3
nSTAND3
AAA_18
Rad17
AAA_2
AAA_14
AAA_17
NTPase_1
RNA_helicase
TsaE
NB-ARC
ABC_tran
AAA_33
AAA_24
AAA_28
NACHT
Sigma54_activ_2
AAA_7
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AEQ52464
UniProt:
G4R984
LinkDB
All DBs
Position
complement(2449512..2450555)
Genome browser
AA seq
347 aa
AA seq
DB search
MTDLTNAAEGRDDSLDVSLRPSGFSEFIGQEAARANLQVFIEAARQRQAALDHVLFVGPP
GLGKTTLAQIISRELGVGFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAVEE
ILYPAMEDFQLDLIIGEGPAARSVRIDLAKFTLVGATTRAGLLTTPLRDRFGIPVRLNFY
TPEELVKIVERGARLMGMAMTSDGALEVARRSRGTPRIAGRLLRRVTDFALVEGATEIDR
KVADKALLRLDVDAKGLDQLDRRYLKTIAEFYGGGPVGIETISAALSEPRDAIEEIVEPY
LIQQGFIQRTPRGRMMTALSFQHMGYAVPQGFAGLQASLFEDEGETE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctcaccaatgccgccgaaggccgcgacgacagtctcgacgtttccctgcgc
ccctcgggtttttccgagtttatcgggcaggaggcggcgcgggccaatctgcaggtgttt
atcgaagcggcgcggcagcgtcaggcggcgctcgatcatgtgttgttcgtcggcccgccg
gggctgggcaagaccacgctcgcccagatcatttcgcgcgagcttggtgtgggctttcgc
gccacgtccgggccggttatcgccaaggcaggcgatctggccgcgcttttgaccaatctc
gaagagcgcgatgtgctgttcatcgacgagatccatcgcctcaatccggcggtcgaggaa
attctctatccggcgatggaggatttccaactcgatctgatcatcggggagggtccggcg
gcgcgttcggtgcgcatcgatctggccaagttcacgctggtgggcgccacgacccgcgcc
ggtcttttgaccaccccattgcgcgaccggttcggcattccggtgcgattgaatttttat
acgcccgaggaactggtcaagatcgtcgagcgcggcgcgcggctgatggggatggcgatg
acctcggacggcgctctggaagtggcccggcgctcgcgcggaacgccgcgcattgcgggg
cgtctcttgcgtcgggtcaccgattttgcactcgtcgagggcgcgaccgagatcgaccgc
aaggtcgccgacaaggcgctgctgcgcctcgatgtcgatgcgaaagggctcgaccagctc
gaccggcgctatctcaagaccatcgccgaattctatggcggcgggccggtgggcatcgaa
accatttccgcagcgctcagcgaaccgcgcgatgccatcgaggaaatcgtcgagccttat
cttatccagcagggtttcatccaacgcaccccgcgcgggcgcatgatgacggcgctctcg
ttccagcacatgggctatgccgtcccgcagggttttgccggcttgcaggccagtcttttc
gaggatgagggagagaccgagtga
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