Paenalcaligenes hominis: PAEH1_08145
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Entry
PAEH1_08145 CDS
T04704
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
phn
Paenalcaligenes hominis
Pathway
phn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAEH1_08145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phn03021
]
PAEH1_08145
03400 DNA repair and recombination proteins [BR:
phn03400
]
PAEH1_08145
Enzymes [BR:
phn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAEH1_08145
Transcription machinery [BR:
phn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PAEH1_08145
DNA repair and recombination proteins [BR:
phn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PAEH1_08145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AQS51537
UniProt:
A0A1U9K0H8
LinkDB
All DBs
Position
complement(1627326..1631441)
Genome browser
AA seq
1371 aa
AA seq
DB search
MPYSYTEKKRIRKSFAKREDVQQVPYLLATQLESFKTFLQRDVLPSERKNEGLQEAFNSI
FPIVSHNQMARLEFVSYVLGEPVFDVKECQLRGLTYASPLRAKVRLVLMDREVSKPTVKE
VKEQEVYMGEMPLMTENGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARV
IPYRGSWLDFEFDPKDILFFRIDRRRKMPVSILLKAIGMTPEAILAHFFEFDHIDLQDDG
GRLQFVSKRWRGEVASFDIKDRDGNIIVEKDKRINARHIRLLDEAKIDYISIPEDTLVGR
TLAKDVVNPETGEVIAKANDELTETMLVEMRAANIREIETLYINDLDQGGYISLTLRTDD
TADQMAARIAIYRMMRPGEPPTEEAVEALFQRLFYSEETYDLSRVGRMKVNSRLGRGEDT
SGPMTLTDEDIVDTIKLLVDLRNGIGQIDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSRPISAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSMALFARLNEYGFLETPYRKV
ENKQVTEEIVYLSAIEESNYIIAQANAELDEDHRFVDDLVACREAGETLMTSPDNVQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPLVGTGIERTVAVDSGT
TVQARRGGIVDHVDAERVVIRVNDDENVAGEVGVDIYNLTKYTRSNQNTNINQRPIVKRG
DLVARGDVLADGASTDLGELALGQNMMIAFMPWNGYNFEDSILISEKVVADDRYTSVHIE
ELTVVARDTKLGAEEITRDISNLSETQLNRLDDSGIVYIGAEVRADDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQVFTREGIERDKRAQSIIDDELR
RYRQDLNDQLRIVEDDAFDRIAKFLDGKEVNGGPRRLAKGSEVSAEYLESLDDRWQWFDI
RLADEEHALVLEQTKDSLEHKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRL
QPGDKMAGRHGNKGVVSRITPVEDMPHMADGTPVDIVLNPLGVPSRMNVGQVLEVHLGWA
AKGIGHRINEMIEQEQGAQVAEIRAYLDKVYNTTGKKAAIVDLTDAEILEMAQNLRAGLP
LATPVFDGATEEEIKVMLELAYPDPIAEKLKLSDDRTQITLYDGRTGEQFERPVTVGYMH
FLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEML
TVKSDDIAGRTKVYENIVKGDHVIDAGMPESFNVLVKEIRSLSLDMDLERK
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgccttattcgtacaccgaaaaaaagcgcatacgcaagagcttcgccaaacgtgaagac
gtacagcaggttccttatttattggcaacacagctggagtctttcaagacgttccttcaa
cgtgacgtcttaccttcggaacgtaaaaacgaaggtctgcaagaagcttttaattccatt
ttccccattgtaagtcataaccaaatggcacggctagagtttgttagctacgtgcttggt
gagcctgtttttgacgtgaaagagtgtcaattacgcggcctgacatacgcttcacctttg
cgtgctaaagtacgcttggtcctaatggatcgcgaggtaagcaaacctaccgtcaaggaa
gtcaaagaacaagaagtctacatgggcgaaatgcctctaatgactgaaaacggttccttt
gtcatcaacggtacagagcgtgtaatcgtatctcaattacaccgctcaccaggtgtgttc
tttgaacatgaccgtggtaagacacacagctcggggaaattgctgttttctgcgcgcgta
attccttaccgtggctcgtggctcgattttgagttcgatccaaaagatattctctttttc
cgtattgaccgtcgccgtaagatgcctgtatccatcttgcttaaagcgattggtatgaca
ccagaagccatcttggcgcacttctttgagtttgatcacatcgatcttcaagacgatggc
ggtcgcttacagtttgtgtccaaacgctggcgtggtgaagtggcgagctttgatattaaa
gatcgcgacggcaacatcattgttgaaaaagacaaacgtattaacgcgcgtcatattcgt
ctcttagacgaagccaaaatcgattacatctccatccctgaagacaccttagtaggtcgc
actttagctaaagacgtggtgaacccagaaacaggggaagtcattgccaaagcaaacgat
gagctgactgaaacgatgttggtcgagatgcgcgccgctaacattcgtgagattgaaacc
ctttacatcaacgatcttgatcaaggtggttatatttctctcacgttgcgtaccgatgat
accgctgaccaaatggcagcacgtattgccatctaccgcatgatgcgtccgggtgagcct
cctaccgaagaagccgtagaggccttattccagcgcttattctatagcgaagaaacctac
gacttgtctcgtgtgggtcgcatgaaagtcaacagccgtttaggccgtggtgaagacacg
tctggtcctatgactctaacagacgaagacattgttgacacaatcaagctacttgtcgac
ttacgtaacggcattggccagattgatgacatcgatcacttaggtaatcgtcgtgtgcgt
tgtgtgggtgaattggctgaaaaccaattccgcgcaggtctagtacgcgttgagcgcgct
gttaaagagcgtttaggtcaagcagaaagtgaaaacttaatgccgcatgatctgatcaac
tcacgtcctatttctgctgcaatcaaagaattctttggttcaagccagctatcgcagttt
atggatcagaccaaccccttgtccgaaatcacgcacaaacgtcgtgtatcggcattaggt
ccaggtggtttgacacgtgagcgcgcgggctttgaggtacgtgacgtacacccaacgcac
tacggtcgtgtgtgcccaattgaaacgccagagggtccaaacattggtttgattaactcc
atggccttgtttgctcgcttgaacgaatacggtttcctagaaactccctatcgtaaagtg
gaaaacaaacaggtcacagaggaaattgtttacctctctgcaatcgaagaaagcaactac
atcattgctcaggctaacgccgagttagatgaagaccatcgttttgttgatgatctggtc
gcgtgtcgtgaagcaggcgaaaccctgatgacttcacctgacaacgtgcaatacatggac
gttgctccttcacagattgtgtctgttgctgcgtcgttgattccgttcctcgagcacgat
gatgcgaaccgagccttgatgggtgccaacatgcaacgccaagcggtgccatgtttacgt
cctgaaaagcccttggtgggtaccggtatcgagcgcacggttgcggtcgactcaggcacg
acagtacaagcacgtcgtggcggtattgtggatcacgtcgatgctgagcgcgtggtgatt
cgtgttaacgatgacgaaaacgtagccggcgaagtcggtgtagatatctacaacctaacc
aagtacacacgttctaaccaaaacacgaatatcaaccaacgtcctatcgtaaaacgtggc
gatttggtggctcgtggtgatgtattggcggatggtgcttctaccgatttaggcgaactc
gccttaggtcagaacatgatgatcgcctttatgccttggaatggttataacttcgaagac
tcgattttgatctcggaaaaagtcgtagctgatgatcgctatacgtccgttcatatcgaa
gagttgaccgttgtagcacgtgatacaaagctaggtgctgaggaaatcacacgtgatatc
agcaacttatctgaaacccaactcaaccgtcttgatgactctggcattgtgtacattggt
gccgaagtccgcgcagatgacgttctggtaggtaaggtcacacctaagggtgaaacacaa
ctgacacccgaggaaaaacttttacgtgctatctttggcgaaaaagcctctgatgtaaaa
gacacctctttacgtgtgccgtccggtatggtgggtacagttattgatgttcaggtcttc
acacgtgaaggcattgagcgagataaacgtgcacagtccattatcgatgacgagctacgt
cgttaccgccaagacctaaacgatcagctacgtattgttgaagacgatgcatttgatcgt
attgccaagttcctagacggtaaagaagtaaacggtggtccacgtcgtttagccaaaggt
tcagaggtttcggctgagtacttggaaagtcttgatgaccgttggcagtggtttgatatt
cgcctagcggatgaagaacacgctttagtcctagagcaaaccaaagactccctcgaacac
aaacgtcatcaatttgacttagcgttcgaagaaaagcgcaagaaacttacccaaggtgac
gagttgcctccaggtgtactgaaaatggttaaggtttacttagctgttaaacgtcgcctc
cagccaggtgataagatggccggtcgtcacggtaacaaaggtgtggtgtctcgcatcact
cccgttgaagacatgccacacatggctgatggtacccctgtggacatcgtactgaaccca
ttaggtgttccgtctcgaatgaacgtgggtcaggtactagaggttcacttaggttgggca
gctaaaggtattggtcatcgcattaatgaaatgatcgaacaagagcaaggtgctcaagtt
gcagaaattcgtgcttatctagataaggtttacaacaccaccggtaaaaaagcagctatt
gttgatttaaccgatgctgaaattctagaaatggcacaaaacctacgtgctggtttgcct
ttggctacgcctgtgtttgatggcgcaaccgaagaggaaatcaaggtaatgctagagcta
gcatatccggaccctatcgccgagaaattaaaactaagcgatgaccggacacagattacc
ttgtacgatggacgtacaggcgagcaattcgagcgccctgtaacagtgggttatatgcac
ttcttgaaacttcatcacttggtcgatgacaagatgcatgctcgttctactggtccgtac
tccttagtgacacagcagccgctaggtggtaaagcacagttcggtggtcagcgttttggt
gagatggaggtctgggctctagaagcttacggcgccgcttacacgctgcaagagatgctc
acagtgaaatctgatgacatcgcaggccgtactaaagtttatgagaacatcgtcaagggt
gatcacgtgattgatgctggtatgccagagtcattcaacgtattggtcaaagaaattcga
tccttgtcccttgacatggatttggagcgtaaataa
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