KEGG   Phaeobacter sp. LSS9: D1820_12230
Entry
D1820_12230       CDS       T05617                                 
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
phq  Phaeobacter sp. LSS9
Brite
KEGG Orthology (KO) [BR:phq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phq03400]
    D1820_12230
Enzymes [BR:phq01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     D1820_12230
DNA repair and recombination proteins [BR:phq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    D1820_12230
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 DUF6558_C VacA2
Other DBs
NCBI-ProteinID: AXT35679
LinkDB
Position
complement(2540575..2541264)
AA seq 229 aa
MPPATARSRPVSRITAVFDRGAVKNGLTVMMKLRLRGFELTKPLLDMDGQQRLIECLRPV
LRAAPLFSPEVPGGGKMSVRMTSAGDYGWVSDRDGYRYEERHPAGRRWPEIPTEILDIWH
ATTGLERRPDCCLINYYGEGARMGLHQDKDEADFSYPVVSISLGDDGLLRIGNQSRGGKT
DTVWLNSGDVVVMGGDARLTYHGVDRIRFKSSRLLPKGGRINLTLRVVT
NT seq 690 nt   +upstreamnt  +downstreamnt
atgccccctgcaaccgccagatcgcgtcctgtttcgcgaattacagcggtttttgacagg
ggagcggttaagaacgggctaacagtgatgatgaagttgcgattgcgggggtttgagctg
acaaaaccccttctggatatggacgggcagcagcggctgattgagtgcctgcgcccggtt
ctgcgcgccgcaccgctgttttcgcccgaggtgcccggtggtgggaagatgtctgtgcgg
atgacgtcggccggggactatggctgggtcagtgaccgggacgggtaccgctatgaagag
cgccatccggccgggcgccgctggcctgagatcccaacagagattctcgacatctggcat
gcgacgaccggtttagagcggcgccctgattgctgtctgatcaactattacggcgaaggc
gcccggatgggcttgcatcaggataaggatgaggcggatttctcctatccggtggtgtca
atctctcttggggacgacggtctgctgcggattggcaatcaatcgcgcggcggcaagact
gataccgtctggctgaattcgggcgatgtggtcgtgatgggcggggatgcccggctgacc
tatcacggggtggatcgcattcggttcaaatcctcacgtctgctgccaaaaggcgggcgg
atcaatctgaccctgcgcgtggtgacctga

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