Paraburkholderia hospita: C2L64_23070
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Entry
C2L64_23070 CDS
T05305
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
phs
Paraburkholderia hospita
Pathway
phs00260
Glycine, serine and threonine metabolism
phs00460
Cyanoamino acid metabolism
phs00630
Glyoxylate and dicarboxylate metabolism
phs00670
One carbon pool by folate
phs00680
Methane metabolism
phs01100
Metabolic pathways
phs01110
Biosynthesis of secondary metabolites
phs01120
Microbial metabolism in diverse environments
phs01200
Carbon metabolism
phs01230
Biosynthesis of amino acids
phs01240
Biosynthesis of cofactors
Module
phs_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
phs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C2L64_23070 (glyA)
09102 Energy metabolism
00680 Methane metabolism
C2L64_23070 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C2L64_23070 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C2L64_23070 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C2L64_23070 (glyA)
Enzymes [BR:
phs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C2L64_23070 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AUT71192
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Position
2:1036749..1038005
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AA seq
418 aa
AA seq
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MFSKEQTIAGFDPELSNAMLLERQRQEDHIELIASENYTSPRVLEAQGSVLTNKYAEGYP
GKRYYGGCEHVDVVESLAIERARQLFGAAYANVQPHSGSQANAAVYLAMLAPGDIILGMS
LAHGGHLTHGAKVSFSGKVFNAVQYGVDASTGLIDYDEVERLALEHRPKMIVAGFSAYSR
VLDFARFREIADRIGAYLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LARANEAIEKKLNSMVFPGTQGGPLMHVIAAKAVAFREALGAEFVAYQKQTLANARAMVA
VFVERGYKIVSGGTDDHLFLVDLIDKGITGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GIRIGTPALTTRGFDQNDAKLTASLVCDVLDHLGDAQTEARVREQVVQLCARLPVYGR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaaagaacagacgatcgcaggcttcgatcccgaactgtcgaatgcgatgctg
ctcgagcggcaacggcaggaagatcatatcgagctgatcgcatcagaaaactacacgagc
ccgcgcgtgctcgaagcacagggttcggtgctgaccaacaagtacgcggaaggctatccc
ggcaagcgttattacggcgggtgcgagcatgtggatgtggtcgagtcgctcgcgatcgaa
cgggctcgacagcttttcggtgcagcgtatgcgaacgttcagccgcatagcggctcgcag
gccaacgcagccgtgtatctggccatgctcgcaccgggcgacatcattctcggcatgagc
ctcgcgcacggcggtcatctgacgcacggtgcgaaagtgtcgttttcgggcaaggtgttc
aatgcggtgcaatacggcgtcgatgcatcaaccgggttgatcgattacgacgaagtcgaa
cggctcgcgctcgaacatcggccgaagatgatcgttgcgggtttttcggcgtactcgcgt
gtgctcgactttgcacgctttcgtgagattgccgatcgtatcggtgcgtatcttttcgtc
gatatggcgcacgtagcgggccttgttgccgccggcctttatccgaatcccattccgttc
gcggatgtcgtgacgacgaccacgcacaagacgttgcgcggtccgcgcggcggcctgatt
ctcgcgcgcgcaaatgaagcgatcgaaaagaagctcaactcaatggtctttccgggcacg
caaggcggcccgctgatgcacgtaatcgcggcgaaagcggtcgccttccgggaggcactc
ggcgcggagttcgttgcctatcagaagcagacattggccaatgcgcgtgcgatggtggcc
gttttcgtcgaacgtggctataagatcgtatcgggcggcaccgacgatcatctgttcctg
gtggacctgatcgataaaggcatcacgggcaaggacgcggacgccgcgctcggccgcgcg
catatcaccgtgaacaagaacgcggtgccgaacgatccacaatcgccattcgtgacgagc
ggcatccgtatcggcacgcctgcactaaccacgcgtggtttcgatcagaacgatgcgaag
cttacggcatcactcgtatgcgatgtgctcgatcatctgggtgacgcgcagacggaagcc
cgcgtacgcgagcaggttgtgcagctttgcgcgcgattgccggtgtatggccgttga
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