Pediculus humanus corporis (human body louse): Phum_PHUM302160
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Entry
Phum_PHUM302160 CDS
T01223
Name
(RefSeq) G/t mismatch-specific thymine DNA glycosylase, putative
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Phum_PHUM302160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phu03400
]
Phum_PHUM302160
Enzymes [BR:
phu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
Phum_PHUM302160
DNA repair and recombination proteins [BR:
phu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Phum_PHUM302160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
NuA4
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
8229843
NCBI-ProteinID:
XP_002427210
VectorBase:
PHUM302160
UniProt:
E0VM66
LinkDB
All DBs
AA seq
1239 aa
AA seq
DB search
MKQEATNDDGYENSVNHFDMRAHGQNEQGGKVNQNMMDQHIPTAPQGVALDHRLQMRRPL
ENHLGQENVRINSVDSSHIDNRLSDVHSTHDPGMNHHQVERENRINSLEGRLNGSESNRG
HENHLTSIETRLVEHDNSVNSIESTINGISGGGIQNNENSLGNHESRLLNQESQISRVEN
RLDSIENHRNPMEAQMGHDSQMSDNESGVVGSHESRIGSQQESQMTRIENRVRHENHLSN
IESRIMAQSSHHLAALENRLGHENHLNSLEKRISNRETNHLNELESRMNGHENCINGLEG
RLNSHDGHLGTLDGRMLAHENRLLESRMESRDNHLSSLGVHDSHLNGLENRLSLRENHIS
HQDSRMSGHGHGHGLTGMDARDSILNAHANHMGLHMSHPGPLDHLQPHPHLQSLHHPHHP
HLHHMHHPHHSHSHVKCDSMEDPYSFVEDDPTGMGGASHVTPQPRPSPIMLQAIPKKRGR
KKKIKPENELGDTVELLKKENGLMKSAAAKERKKHDRFNGMPEEEVVKRTLPDHLTTNLD
IVIIGINPGLFAAYKGHHYAGPGNHFWKCLYLSGLTPEPMTADDDYKLLSVGIGFTNMVA
RATKGSADLTRKEIKEGSQILLEKLQKFKPKIAVFNGKLIYEVFSGNKDFNFGRQPDFVD
GTNTYMWVMPSSSARCAQLPRAADKVPFYAALKKFRDYLNGLIAELDENEVVFNDQKLKT
FYESDINVESKDDQGSYYSYSRLANNDLTDLSNAVVKKEPYDPGRPEKKKRGRPKKIKIN
GVEVPPPKERIKKEKLPVDGDIPKKKRGRPKKIKSENGGIGAERRMLPQNVSIQNGSLNV
SEHTSSSNPASTCFSPPIQSPSGFCPGFSPAYASQNQNPVSSQFNPRAPSPAYHPSPHHP
SPLPTQYSQSPPPASQSQSQPFTHSDLSSEISAAISSEHLGSPPPTSPSLGPPDFEPPTS
MPEDTATMSVKEEPEPECRFSSPAPSEPAPYQYRAFSEANIEHKNANSQFQRQSSPEFAS
KRANQDVSSKSLSGLESLVDQIPSIAEGGSGNSVSGTNTEGFESQHSGQYEDYLGYPGYS
TAPAAPTPQSAYPHYTSSTNYSTAGYLPPSQSSFSVSSLANSASHGHEPQVASSFSVSSL
ASNYTAGGYPNLMGAPHLVVPQPGLFPTGMNMTPNYQYPSQYPGGPTSFPYSPHALHVPS
PNYPPYGPYSNSSYPQPYLANHVLDRIKQERMDIGFGSF
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggaagcaacaaacgatgatgggtatgaaaatagtgttaatcattttgatatg
agagcacatggtcaaaatgagcagggaggaaaagtaaatcagaacatgatggaccaacat
atacctactgcgccacaaggcgttgcattagatcataggcttcagatgaggcgccctttg
gaaaatcatttaggacaagaaaatgttagaatcaattccgtggattcatcacacattgac
aatcgattgagcgatgttcattcgactcatgatcccggaatgaatcatcatcaggtcgaa
cgggaaaacagaattaattcactcgagggacgattaaatggaagtgaaagtaatcgcgga
cacgagaatcatcttacctcgatcgaaactagattagttgaacatgataattctgttaac
agtattgaaagcacaataaacggcattagtggcggaggaatacaaaataacgaaaattct
ttaggtaatcacgagagtagacttttaaatcaggaaagtcaaatatctagagttgaaaat
cgattagattctatagaaaatcatagaaatcctatggaagctcaaatgggacacgatagt
cagatgagcgataatgaaagcggagttgtaggaagccacgaatccagaatcggaagtcaa
caagaaagtcaaatgacgagaatcgagaatagagtaagacacgagaatcatttgagcaac
atagaaagtagaataatggctcaaagcagtcatcatttggcggcgttggaaaataggctg
ggacacgagaatcatttgaacagtttagagaaaagaataagcaaccgggaaacgaatcat
ttaaacgaactcgaaagcagaatgaacggtcacgaaaactgcatcaacggattagaaggt
cgattgaactctcacgatggacacttgggtactttggacggtagaatgctcgctcacgaa
aatcgcttgctggaaagtagaatggaaagtcgtgacaatcatttgagcagtttaggagtt
cacgatagtcatttgaacggattagaaaacaggttgagcctaagggaaaatcacattagt
catcaagactcgagaatgagcggacacggtcacggacacggtttgacgggaatggatgcg
agagacagcattctcaacgctcatgccaatcacatgggtcttcacatgagtcaccccgga
cccctcgatcaccttcaaccgcatcctcatttgcaaagccttcatcacccgcatcatcct
cacttgcatcacatgcaccatcctcatcatagtcattcacacgtgaaatgtgattcaatg
gaagatccgtatagtttcgtagaagatgatcctacgggcatgggtggcgcgtcgcacgtg
actcctcagcccagaccgtcgcctatcatgcttcaagctattcctaaaaaaagaggaaga
aaaaagaaaatcaaaccggaaaacgagttgggtgatacggtggagcttttaaaaaaggaa
aatggattgatgaagtcggcggcggcaaaagagaggaaaaaacacgacagatttaatgga
atgccagaggaggaggttgttaaaaggacgctcccggaccacttaactacgaacctcgac
attgttattatcggtatcaatcctggattgtttgctgcctacaagggacatcattatgcc
ggtccaggcaatcatttctggaaatgtttgtacctgtcaggtttgactccggagcccatg
acggctgatgatgattataaattattgtccgttggaatcggttttacaaatatggtggca
agagctacgaaaggtagcgcggatttaactagaaaagaaataaaagaagggagtcaaata
ttactggaaaaacttcaaaaattcaaacctaaaatagccgtttttaatggtaaactcatt
tacgaagttttttccggtaataaagattttaattttggacgacaacctgattttgtcgac
ggcacgaatacgtacatgtgggtgatgccttcctcgtcggctagatgcgctcaattgcca
agagctgccgacaaagtaccattttatgccgcattgaaaaaatttcgcgattatttaaat
ggtttgattgcggaattggatgaaaacgaagttgtttttaatgatcaaaaattgaaaaca
ttttacgaatctgatattaatgtggaaagcaaagatgatcagggaagttattattcgtat
tcacgtttggcgaataacgatctcacggatctcagcaatgcggttgtcaaaaaggagcct
tacgatccgggtagaccggaaaaaaagaaacggggccgacctaaaaaaataaaaataaac
ggagttgaagttccgccgccgaaggaaaggattaaaaaggaaaaacttcccgttgacggt
gatataccgaagaaaaaaagagggagaccgaaaaaaatcaaatcggaaaatggaggaata
ggagcggagcgtagaatgctaccacaaaacgtgagcattcaaaacggaagtttgaatgtg
tccgaacatactagttcttccaatccggcatctacttgcttttcgcctccgattcaatct
ccttcgggtttttgccccggattttctcccgcttatgcttcccagaatcaaaatcccgtt
tcttctcagtttaatcccagggcaccgtcgcccgcgtatcatccatctccacatcatcct
tctccgttacctactcagtattctcagtcgcctccaccggcttcacaatctcagtcccaa
ccgttcactcattcggatctcagttcggaaatttcagctgccatttcttcagagcattta
ggatctccgccgcctacctctcccagtctgggacctccagatttcgaacctcccacgagt
atgcccgaagacacagctacgatgtccgtcaaagaagaaccggaaccggagtgtagattt
tcttctcctgcgccttcagagcctgctccttatcagtatcgagctttttctgaagcgaac
attgaacacaaaaatgcgaattctcagtttcagcgtcaatcttctcctgaattcgcttca
aaacgtgcaaatcaagacgtttcttcgaagagcttatcaggattggaatcgttagtggat
caaattcccagcatcgcggaaggcggttccgggaattcagtttctggcactaataccgaa
ggctttgagtctcagcattctggtcaatacgaagactacctcggatatccagggtacagc
acggctccggcagctccgacgcctcagtctgcttatccacattacacatccagtacaaat
tattcgacggctgggtatttgcctccctcccagagtagtttttccgtgagttctctggca
aacagcgcgtcacacggccacgaacctcaagtggcaagttcattttcggtcagtagtttg
gcttccaactacacggccggcggttacccgaatttaatgggcgctccgcatctcgtcgta
ccccagcccggcctttttccaaccggcatgaacatgactccaaattatcagtatccgagt
caatatccgggcggtcccacgtctttcccctactctccgcacgctctccacgttcctagt
ccaaattatccaccctacggaccgtattcgaattcatcgtatccgcaaccctatctggcc
aatcacgtactagatcgaatcaaacaagagcgcatggatataggttttgggagtttttga
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integrated database retrieval system
