Pangasianodon hypophthalmus (striped catfish): 113534965
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Entry
113534965 CDS
T05759
Symbol
hcfc1
Name
(RefSeq) host cell factor 1
KO
K14966
host cell factor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03083
Polycomb repressive complex
phyp04980
Cobalamin transport and metabolism
phyp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113534965 (hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
113534965 (hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113534965 (hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113534965 (hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113534965 (hcfc1)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113534965 (hcfc1)
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113534965 (hcfc1)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
113534965 (hcfc1)
HMT complexes
COMPASS/SET1 complex
113534965 (hcfc1)
MLL-HCF complex
113534965 (hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
113534965 (hcfc1)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
113534965 (hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
113534965
NCBI-ProteinID:
XP_026783788
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MASSGTNTTSSGSGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDE
LHVYNTATNQWFIPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRW
EWKRLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLEL
RPGSNVAGWDIPITYGVLPPPRESHTAVVYTEKTSKKSRLVIYGGMSGCRLGDLWTLDID
TLTWNKPAISGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLAC
LNLDTMTWETILMDTLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWY
LETDRPLAPSRVQLVRANTSSLEVSWGAVPTADAYLLQLQKYEIPAATTASSPSVTPTSS
LPSNSPKSPAPAAAAPASQSVPVTGVTLIPQVPSPTMSMPGSPLAAASPRGPAILKVAAP
QSTAGTSIVTVRQANQVGKSPVTVASLPAGVRMVVPAQSAQGTPIGSSPQMSGMAALAAA
AAATQKIPPSSTATVLNVPAGATIVKTVAVTPGSAAHPATVKVASPVTVSNPATRMLKTA
AAQAGTSTITTPNTPTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPLTMGSG
GALISSLGKVMSMVQTKPVQTSAVTGQAGSPVTQIIQTKGPLPAGTILKLVTSADGKPTT
IITTTQAGGAGTKPTILGISPTTTTKPGTTIIKTIPMSAIQQGAAGATSSTGIKSPITII
TTKMMTPGTPGKIITAVPKLAAGTAQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVSPGT
VSAVKPTVTTLVVKGTTGVTTLGTVTGTISTSLAGGNVATANASLATPITTLGTIATLSS
QVISPTAITVSAAQTNLTTAPTVAIQAATQPTQVTLISTPSGVEAQQDLPVSILASPTSE
QPSTTGAEAGDAPGEVTLVCSNPPCETHETGTTNTATTASAKIGTERVCSNPPCETHVTG
TTNTTTTASADMSRVQQVCSNPPCETHETGTTNTSTLVSSNMGTETNTVQRVCSNPPCET
HETGTTNTATQASSSMGSAETNTVQRVCSNPPCETHETGTTNTATQASSSMGSAETNTVQ
RVCSNPPCETHETGTTNTATQASSSMGSAETNTVQRVCSNPPCETHETGTTNTATQASSS
MGSAETNTVQRVCSNPPCETHETGTTNTPTQASSTIGAGQNGMVQRVCSNPPCETHETGT
TNTATTATSSLESAEGTVQQSGNGQDAGTSAEATSSTEPANPPIQSRAITTVTQATPTPG
PSVPEISSMAGSAAVVEGSGEAEAMEQGDSEAVAMGEEPMQTEGELGEEGAVRVVAIEEG
AAGEAGTMLQVHVAMEAQPGQGEQAEMEQGGEGAEAVALAGQDSEALALPQELMSAEGQQ
TTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLNEGDAGQDGQQT
TTIPIVLTQQELAALVQQQQQLQEVQAAAAAAAQQLGANSGAAPLPTEGLAPADSLNDPT
TESNGHEMAAAAVTGAVAQLLPSTSAETLAPSSTLAPAQPMVVASPAKIQAATALAEVAN
GIESAAGKPGAPPAVVKPPVKKENQWFDVGIVKVTNMVVTHYYVPADDSEVTDDDSGALP
DYSQMKKVELSPGTAYKFRVAGINACGRGTFSEVSAFKTCLPGFPGAPCAIKISKVSFEX
PSVTSGKIIEYSVYLAIQSSQTTEAKASAPAQLAFMRVYCGPNPSCLVQTSSLSNAHIDY
TTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAAKRPVSSPDTKGTGPKKARA
DQ
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctggtaccaacaccacatcgagcggttcgggctcagtgctgcagccgagg
tggaagcgggtgctcggatggtccggcccggtgcctcggcctcgtcacggccaccgcgcc
gtcgccattaaagagctgatggtggttttcggcggcggcaacgaaggaatcgtcgatgaa
cttcacgtatacaacacagcgactaatcagtggtttatcccggctgtccggggcgacgtg
ccacccggctgtgctgcgtatggatttgtgtgtgatggcacccggttgttggtgttcggg
ggaatggtcgaatatggaaaatacagcaacgatctctacgaactacaggccagtagatgg
gagtggaaacggctgaagcctaaagctccaaagaacggcccgcctccttgcccacgtttg
ggccacagcttctccctcgtggggaataaatgctacctattcggcggacttgccaatgac
agcgaagatcccaaaaacaatattccaagatacctgaatgatctgtacacactcgagctc
cgtccgggctccaacgtagcaggctgggacatccccatcacatacggcgtgcttcctcct
cctcgcgagagccacacagctgtagtctacacagagaaaacctcaaagaagtctcgcctc
gttatctacggaggcatgagcggctgccgcctcggagacctctggacattagatatagac
acacttacttggaacaagccggcaatcagtggcactgctcctctccctcgcagtctccac
tctgccactaccataaccaacaagatgtacgtgtttggcgggtgggtgcccttggtgatg
gatgacgtgaaagtggctacacatgaaaaggaatggaagtgtacaaacacactggcatgt
ctaaatctggacacaatgacatgggagactattttaatggacactctggaagacaacatc
ccaagagccagggcagggcactgctccgtagctatcaactcccgactgtacgtttggagt
ggcagagacggctaccgcaaagcctggaacaaccaagtgtgctgcaaagatctctggtat
ttagagacagaccgtccactggcgccctctcgcgtacagttggttcgtgccaatacaagt
tctctggaggtgagctggggcgctgtgcccactgctgatgcctacctgctgcagctgcag
aaatacgaaattccagcagcaacgacagcctcctctcccagcgtcactcctacttcatcg
ctgccctccaactctcccaagagcccggccccggccgccgctgcccctgcctctcagagc
gtgcctgtcacaggggtcaccctcataccccaggtgccctcaccaaccatgtccatgcct
gggagcccgctcgctgcagcctcaccgcgtggtccagccatcctgaaagtggcagcacct
cagtccactgctgggacgtctattgtcactgtgcgtcaggccaatcaagtaggaaaatcc
ccagttacagttgcatcacttcctgctggagtacgtatggtcgttcctgcacagagcgca
caaggaacaccgatcggaagcagccctcagatgagtggcatggctgctctggctgcagct
gcggctgccacacagaaaatccctccttcatcaacagccactgtgctgaacgttccagca
ggagccaccatagtgaaaactgttgctgtcactccaggctccgcagctcatcctgctaca
gtgaaagtagcctcaccagtgactgtgagcaacccagccacccgcatgctaaagacagct
gcagctcaggctggaacttccaccatcactacccctaacacgccaacacgtcccatcatc
actgtgcacaaatcaggcacagtgactgtggcccagcaggcccaggtggtcaccactgtg
gtgggaggagtcactaaaaccatcacactcgtcaagagcccgctcactatgggcagcggc
ggcgctctgatctctagcctggggaaggtgatgtccatggtccagacaaaaccagtacag
acctctgcagtgaccggacaagctggtagcccggtcacacagatcatacagacgaagggt
cctctgcctgcaggcaccatactgaagctagtcacctcagcagacggcaaacccactacc
atcatcactaccacgcaggcaggtggcgctggcaccaaaccaaccattctgggcatctcc
cctaccactactaccaagcctggcaccaccatcatcaagaccatcccaatgtctgctatt
cagcagggagctgcaggtgctaccagtagcactggtataaagtctcctatcacaatcatc
acaaccaaaatgatgacgccgggcacaccaggaaaaatcatcaccgcagtaccaaaactg
gctgcaggaactgctcagcagggagtgactcaggtggtcctgaagggggcaccagggcag
cctggcaccattcttcgcactgtgcccatgggaggtgtgcgtctcgtttctcctggtaca
gtttctgctgtcaaacccacagttaccacactagtggttaaaggaaccacaggagtaact
actcttggcactgtgaccggaacaatctcaaccagcctggcagggggcaacgttgccact
gccaatgctagcctggctacacccataaccaccctgggcaccatcgccacgctttccagc
caggttatcagccccacagctatcaccgtgtctgcagcccagacaaacctgactactgca
cctacagtggccatacaggcagctacacagcccactcaggtgacgctgataagcacccct
agtggcgtggaggcgcagcaggacctccccgtgtccatcctagcctcccccacctctgaa
cagccttccaccacaggtgctgaagcgggcgatgccccaggtgaagtcactctggtctgc
tccaacccaccatgtgagacccatgaaaccggtaccaccaacacggccaccacagcctct
gccaagattggaactgagcgtgtgtgttctaacccaccttgtgagacgcacgtgactgga
acaaccaacacgacgaccacggcatcggctgacatgagccgcgtgcagcaagtgtgcagc
aacccaccatgcgaaacacatgaaacgggcaccacaaacacatctacactggtgtcctcg
aacatgggcacagagaccaacacggtacagagagtgtgttccaacccaccttgtgagacc
cacgaaactggcaccaccaacacagctacgcaggcatcttcgagtatgggaagcgcggaa
accaacacagtacagagagtatgttctaacccgccatgtgagacccatgaaaccggcacc
accaacacagctacgcaggcatcttcgagtatgggcagtgcggaaaccaacacagtacag
agagtgtgttctaacccgccatgtgagacccacgagaccggcaccaccaacacagctacg
caggcatcttcaagtatgggcagtgcggaaaccaacacagtacagagagtgtgttccaac
ccaccatgtgagacccatgagaccggcaccaccaacacagctacgcaggcatcttcgagt
atgggcagtgcggaaaccaacacagtacagagagtgtgttctaacccgccatgtgagacc
catgagactggcaccactaatacacccacacaggcttcatccaccatcggagcagggcaa
aatggcatggtgcagagagtgtgttccaacccgccatgtgagacccacgagacaggcacc
acaaacacagctactaccgccaccagcagcctcgagtcagcagaaggaacagtacaacag
agcggtaatggacaagatgctggcaccagtgctgaggcaacttcgtcgacagaacctgcc
aatcccccaattcagagcagagccatcaccacagtgacgcaggccacacccaccccagga
ccctctgttcctgaaatctcatccatggcaggctctgctgctgtagtggagggctctggt
gaagctgaggcaatggagcagggagattctgaggcagtagcaatgggcgaggagcccatg
caaactgagggtgaactgggtgaagagggagcagtcagagttgttgctattgaggaaggt
gctgccggtgaggcgggcaccatgctgcaggttcacgttgctatggaagcacagccgggc
cagggagagcaggctgagatggagcagggtggtgagggtgcggaggccgtagctctggca
gggcaggactccgaggccttggcactgcctcaggaactgatgtcagccgaggggcagcag
accacgctgatggtgacaggactgaccccggaggaactggccgtcactgcagcagcagaa
gctgctgctcaggctgcagccacagaagaggcccaagcgctcgccatacaggctgtgctg
caggcagcccaacaggccgtgctcaatgaaggagacgctggacaggatggtcagcagacc
accaccattcccattgtactgacgcaacaggaactggctgctctggtccagcagcagcag
caactccaggaggttcaagcagcagcagccgccgctgcccagcagctgggcgccaattcg
ggtgcagcgcctctgcccactgagggcctcgcgcctgcggacagcctcaacgaccccacg
accgagagcaacggccatgagatggccgccgcagcagtaactggagccgtggctcagctt
ctacccagcacttctgcagagactttggctccatcgagtacacttgccccggcccagccc
atggtggttgccagccctgccaagatacaggccgccactgcacttgctgaagtggccaat
ggcattgagtctgcagctgggaagccaggagcaccccctgcagttgtgaaaccgccagtg
aagaaagaaaatcagtggtttgatgttggaatagtcaaggtgaccaacatggtcgtcaca
cactattatgtcccagcagatgattcggaggttactgatgatgattctggggccttacca
gactacagtcaaatgaagaaagtggagctctctcctggcactgcgtacaagttccgcgtg
gctggaatcaacgcttgtggccgtggaacgttttctgaagtgtcggcattcaagacctgc
ttgcctggcttccctggagcaccatgtgccattaaaatcagcaaggtgagctttgagnct
ccatctgtgacgtcggggaagatcatagagtactccgtctacctggccattcagagctct
cagacgaccgaggcaaaagcatctgccccggctcagctggccttcatgcgggtgtactgt
gggccaaacccctcctgcctagtccagacctccagcttgtccaacgcccacatcgactac
accaccaaacctgccatcatcttccgcattgccgcccgcaacgagaagggctacggccct
gctacgcaagtcaggtggctacaagaaaccagtaaagatggatctgctgccaaacctgca
gcaaagagaccggtctcatctcctgatacgaaaggtaccggtccaaaaaaggccagagcc
gaccagtga
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integrated database retrieval system
