KEGG   Pangasianodon hypophthalmus (striped catfish): 113535170
Entry
113535170         CDS       T05759                                 
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
  KO
K15732  RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:phyp01009]
    113535170 (ctdp1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phyp03021]
    113535170 (ctdp1)
Enzymes [BR:phyp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     113535170 (ctdp1)
Protein phosphatases and associated proteins [BR:phyp01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   113535170 (ctdp1)
Transcription machinery [BR:phyp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     113535170 (ctdp1)
SSDB
Motif
Pfam: FCP1_C NIF Biotin_lipoyl BRCT PTCB-BRCT RTT107_BRCT_5 HlyD_3 Biotin_lipoyl_2
Other DBs
NCBI-GeneID: 113535170
NCBI-ProteinID: XP_026784169
LinkDB
Position
Unknown
AA seq 942 aa
MEEAAGSGAAAAPAGLRTAVTEIRLPAGARAVRLREWKVEPGALVKVDSVVALCVAVPTD
AECGSEDREQPKRRLPEKKVKSDRAGVVRELCYQLGEVISPGDVIARIEECSHPIVMKGL
CAECGQDLTQLQSRNGKQQTPISTAMVSMVHSVPELMVSSEQAEQLGREDQKRLHRNRKL
VLMVDLDQTLIHTTEQHCQHMSTKGIFHFQLGRGEPMLHTRLRPYCKEFLEKISKMYELH
VFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDD
REDVWKFAPNLITVKKYVYFKGTGDINAPPGSREAQLAKKSAGSLASQTVENTSTSGSSA
DEGKNNGLRKQDKDKKSLQDEMSVCVPDIQGASDSQRTSPDGKRTEKPHLSNKSDIKVEE
LGGLDRTKQSGETVDQENVTVADGNDSAKPGLPHNKNDQLLETIKPKEPDADEECCSTEE
NGDGGLDTDSVCDVDEESFGDNGCSDKKETETESQNSEQSGVTMGEESLDHSMVDEEEEE
EEEEDTDQDDHLIYLQEILMRIHNEYYSRYEAYLRGDSSEMPDIRKIVPELKSSSLAGTT
IVFSGLYPTNYPMERTRESYHAKALGAKISKSLVLNAKDPDCTTHLIAARAGTEKVRQAL
ACKHLHVVNPDWLWGCLERWERVEEQLFPLKEDYTKSHRSNSPSPFPDVQESFPAPVIDP
VSIQPKGPLAPEVHTYDSVTGKLIRRGPQVPRHPQKSSVTLPGNEVHLNFRDLRFLQQED
VDSSRPDDEQPAPSRRKRQPSLSETMPLYTLCKEDLDSMDREVDDILGEESDNDSEGKEK
EERVEGEEEDEEASRLSAEPADYQQAEGTTVKDTSSTSKEESSRTGSIPRGHKRKLQDTR
EDDDDKDGDLASQSSKESNEDGSSSEADEMAAALEAELNDFM
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggaggaggccgcgggctcgggcgctgctgcagctcctgcgggcctcaggacggcggtg
acggagatccggctgccggcgggagcgcgcgctgtgcggctgcgggagtggaaggtggag
cccggagctctggtgaaggtggactccgtggtcgcgttatgtgtggcggttcctacggac
gcggagtgcggctcagaggaccgagagcagccgaagaggcggttaccggagaagaaggtg
aagtctgaccgcgccggagtggtgagagagctgtgttatcagctcggagaggtcatatct
cccggggatgttatcgcgagaatagaagaatgcagccatcccattgtgatgaagggtctg
tgtgctgagtgtggtcaggacttaacacagctgcagagcaggaatgggaagcagcagacc
cccatctccacagcaatggtttccatggtgcacagtgttcccgagctgatggtcagctca
gagcaagcagagcagcttggccgagaagaccagaagaggctccacagaaacaggaagctg
gttctcatggtggatctggaccagactctaatccacaccacagagcagcactgtcagcac
atgtctaccaaaggaattttccacttccaactggggagaggggagcccatgctgcacacg
cggctcaggccttactgcaaagagttcctggagaagatttccaagatgtatgaactgcat
gtgtttactttcggaagtcgcctctatgcacacaccattgcaggctttttggatcctgaa
aagaaacttttctcacatagaatcctgtctagagatgagtgcattgacccgttctccaag
acaggaaatctgagaaatttgttcccatgtggcgactccatggtgtgcatcattgacgat
agagaggatgtgtggaagtttgctcctaacctcattactgtgaagaagtatgtctacttc
aagggaacgggtgacatcaatgccccacccggctcacgagaggcccagctggcaaaaaaa
agtgcaggtagcctggcgagtcaaactgtagagaacaccagcacatctggatcatcagcc
gatgaggggaagaataacggcctccggaaacaggacaaggataaaaagtctctgcaggac
gaaatgtcagtctgtgtccctgacattcaaggagcatcagatagccagagaacttctcct
gatggaaagaggacagaaaaaccacatttgagtaataaatctgatattaaagtagaggag
ttgggaggcttggataggacgaagcagtctggtgagactgtagaccaagagaatgtaaca
gtagctgatggtaatgactcggctaaaccgggattaccacataataaaaacgatcagctc
ttagaaaccataaaacctaaagaaccagacgcagatgaagagtgttgcagtacggaggag
aatggagacggaggattagacactgacagtgtctgtgatgtggatgaggagagttttggt
gataatggatgttctgacaagaaggaaaccgagacagagtctcagaacagtgagcagtct
ggtgtcaccatgggagaggagtctttagaccacagcatggtggatgaagaagaagaggag
gaggaggaggaagacacagaccaggacgatcacttgatttacctacaagagatcttgatg
cgtattcacaatgagtactactcgcgctacgaggcttacctccggggggacagctccgag
atgccggacattcgtaaaatcgtccctgagctgaagagcagttcactggcaggcaccacc
atcgtcttcagtggcttgtaccccacaaactaccccatggagcgaacacgagagagctac
cacgcaaaagccctgggtgccaagattagcaagagcctcgtgctcaatgccaaagatcca
gactgcaccacccacttaatagctgcacgtgcaggtacggagaaggtccggcaggccctg
gcctgtaagcacctgcacgtagtgaaccctgattggctttggggctgcctggagcggtgg
gagagagtggaagagcagctgttcccgctgaaggaggactacacgaaatcacacagaagt
aatagcccatcaccatttcctgatgttcaagagtccttcccagcgcctgttattgaccct
gtttccatccagcccaagggcccgctggctccagaggtgcacacgtatgactctgtaact
gggaagttgatccgaagaggccctcaagtgccacgtcacccccagaaatcatctgtgacg
ctgccaggaaatgaagtgcacttaaactttagggatttgagatttctgcagcaggaagat
gttgacagctcaagaccagatgatgagcagcctgcaccttcacgcaggaaacgacagccg
agtctgtctgaaaccatgcctctctacacgctctgcaaggaggaccttgacagtatggac
agagaggtggatgatattcttggagaagaaagtgataatgatagtgagggaaaagagaag
gaggagagagtggaaggagaagaggaagatgaggaggccagcaggctgagtgctgaacca
gcagattaccaacaggccgagggcacgaccgtcaaagacacatcatcaacatccaaagaa
gaaagcagtcggactgggagcataccgagaggccacaagagaaaactgcaggacaccaga
gaagacgacgatgacaaagatggagacttggccagccagtccagtaaggagtctaatgag
gacggtagtagctcagaagcagatgagatggccgctgccctggaggcagagctaaatgac
ttcatgtga

DBGET integrated database retrieval system