Pangasianodon hypophthalmus (striped catfish): 113535170
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Entry
113535170 CDS
T05759
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113535170 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113535170 (ctdp1)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113535170 (ctdp1)
Protein phosphatases and associated proteins [BR:
phyp01009
]
HAD phosphatases
Fcp/Scp phosphatases
113535170 (ctdp1)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113535170 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCP1_C
NIF
Biotin_lipoyl
BRCT
PTCB-BRCT
RTT107_BRCT_5
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-GeneID:
113535170
NCBI-ProteinID:
XP_026784169
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MEEAAGSGAAAAPAGLRTAVTEIRLPAGARAVRLREWKVEPGALVKVDSVVALCVAVPTD
AECGSEDREQPKRRLPEKKVKSDRAGVVRELCYQLGEVISPGDVIARIEECSHPIVMKGL
CAECGQDLTQLQSRNGKQQTPISTAMVSMVHSVPELMVSSEQAEQLGREDQKRLHRNRKL
VLMVDLDQTLIHTTEQHCQHMSTKGIFHFQLGRGEPMLHTRLRPYCKEFLEKISKMYELH
VFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDD
REDVWKFAPNLITVKKYVYFKGTGDINAPPGSREAQLAKKSAGSLASQTVENTSTSGSSA
DEGKNNGLRKQDKDKKSLQDEMSVCVPDIQGASDSQRTSPDGKRTEKPHLSNKSDIKVEE
LGGLDRTKQSGETVDQENVTVADGNDSAKPGLPHNKNDQLLETIKPKEPDADEECCSTEE
NGDGGLDTDSVCDVDEESFGDNGCSDKKETETESQNSEQSGVTMGEESLDHSMVDEEEEE
EEEEDTDQDDHLIYLQEILMRIHNEYYSRYEAYLRGDSSEMPDIRKIVPELKSSSLAGTT
IVFSGLYPTNYPMERTRESYHAKALGAKISKSLVLNAKDPDCTTHLIAARAGTEKVRQAL
ACKHLHVVNPDWLWGCLERWERVEEQLFPLKEDYTKSHRSNSPSPFPDVQESFPAPVIDP
VSIQPKGPLAPEVHTYDSVTGKLIRRGPQVPRHPQKSSVTLPGNEVHLNFRDLRFLQQED
VDSSRPDDEQPAPSRRKRQPSLSETMPLYTLCKEDLDSMDREVDDILGEESDNDSEGKEK
EERVEGEEEDEEASRLSAEPADYQQAEGTTVKDTSSTSKEESSRTGSIPRGHKRKLQDTR
EDDDDKDGDLASQSSKESNEDGSSSEADEMAAALEAELNDFM
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggccgcgggctcgggcgctgctgcagctcctgcgggcctcaggacggcggtg
acggagatccggctgccggcgggagcgcgcgctgtgcggctgcgggagtggaaggtggag
cccggagctctggtgaaggtggactccgtggtcgcgttatgtgtggcggttcctacggac
gcggagtgcggctcagaggaccgagagcagccgaagaggcggttaccggagaagaaggtg
aagtctgaccgcgccggagtggtgagagagctgtgttatcagctcggagaggtcatatct
cccggggatgttatcgcgagaatagaagaatgcagccatcccattgtgatgaagggtctg
tgtgctgagtgtggtcaggacttaacacagctgcagagcaggaatgggaagcagcagacc
cccatctccacagcaatggtttccatggtgcacagtgttcccgagctgatggtcagctca
gagcaagcagagcagcttggccgagaagaccagaagaggctccacagaaacaggaagctg
gttctcatggtggatctggaccagactctaatccacaccacagagcagcactgtcagcac
atgtctaccaaaggaattttccacttccaactggggagaggggagcccatgctgcacacg
cggctcaggccttactgcaaagagttcctggagaagatttccaagatgtatgaactgcat
gtgtttactttcggaagtcgcctctatgcacacaccattgcaggctttttggatcctgaa
aagaaacttttctcacatagaatcctgtctagagatgagtgcattgacccgttctccaag
acaggaaatctgagaaatttgttcccatgtggcgactccatggtgtgcatcattgacgat
agagaggatgtgtggaagtttgctcctaacctcattactgtgaagaagtatgtctacttc
aagggaacgggtgacatcaatgccccacccggctcacgagaggcccagctggcaaaaaaa
agtgcaggtagcctggcgagtcaaactgtagagaacaccagcacatctggatcatcagcc
gatgaggggaagaataacggcctccggaaacaggacaaggataaaaagtctctgcaggac
gaaatgtcagtctgtgtccctgacattcaaggagcatcagatagccagagaacttctcct
gatggaaagaggacagaaaaaccacatttgagtaataaatctgatattaaagtagaggag
ttgggaggcttggataggacgaagcagtctggtgagactgtagaccaagagaatgtaaca
gtagctgatggtaatgactcggctaaaccgggattaccacataataaaaacgatcagctc
ttagaaaccataaaacctaaagaaccagacgcagatgaagagtgttgcagtacggaggag
aatggagacggaggattagacactgacagtgtctgtgatgtggatgaggagagttttggt
gataatggatgttctgacaagaaggaaaccgagacagagtctcagaacagtgagcagtct
ggtgtcaccatgggagaggagtctttagaccacagcatggtggatgaagaagaagaggag
gaggaggaggaagacacagaccaggacgatcacttgatttacctacaagagatcttgatg
cgtattcacaatgagtactactcgcgctacgaggcttacctccggggggacagctccgag
atgccggacattcgtaaaatcgtccctgagctgaagagcagttcactggcaggcaccacc
atcgtcttcagtggcttgtaccccacaaactaccccatggagcgaacacgagagagctac
cacgcaaaagccctgggtgccaagattagcaagagcctcgtgctcaatgccaaagatcca
gactgcaccacccacttaatagctgcacgtgcaggtacggagaaggtccggcaggccctg
gcctgtaagcacctgcacgtagtgaaccctgattggctttggggctgcctggagcggtgg
gagagagtggaagagcagctgttcccgctgaaggaggactacacgaaatcacacagaagt
aatagcccatcaccatttcctgatgttcaagagtccttcccagcgcctgttattgaccct
gtttccatccagcccaagggcccgctggctccagaggtgcacacgtatgactctgtaact
gggaagttgatccgaagaggccctcaagtgccacgtcacccccagaaatcatctgtgacg
ctgccaggaaatgaagtgcacttaaactttagggatttgagatttctgcagcaggaagat
gttgacagctcaagaccagatgatgagcagcctgcaccttcacgcaggaaacgacagccg
agtctgtctgaaaccatgcctctctacacgctctgcaaggaggaccttgacagtatggac
agagaggtggatgatattcttggagaagaaagtgataatgatagtgagggaaaagagaag
gaggagagagtggaaggagaagaggaagatgaggaggccagcaggctgagtgctgaacca
gcagattaccaacaggccgagggcacgaccgtcaaagacacatcatcaacatccaaagaa
gaaagcagtcggactgggagcataccgagaggccacaagagaaaactgcaggacaccaga
gaagacgacgatgacaaagatggagacttggccagccagtccagtaaggagtctaatgag
gacggtagtagctcagaagcagatgagatggccgctgccctggaggcagagctaaatgac
ttcatgtga
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