Pangasianodon hypophthalmus (striped catfish): 113535966
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Entry
113535966 CDS
T05759
Symbol
cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113535966 (cacna1h)
04020 Calcium signaling pathway
113535966 (cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113535966 (cacna1h)
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113535966 (cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113535966
NCBI-ProteinID:
XP_026785394
LinkDB
All DBs
Position
Unknown
AA seq
2319 aa
AA seq
DB search
MTDGEGRERFQYLESGEVRVPVAALYRAHGHGHAAEDEEKGSTWGPDGSEGSNSSETRGS
ADGGGDAPAPDGASEEQEQQPYPALAPVVFFCVKQTTRPRSWCLRVVCNPWFEHVSMLVI
LLNCVTLGMFQPCEDVKCQSEWCVILQAFDDCIFAFFAVEMVIKMMALGIFGSKCYLGDT
WNRLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPML
GNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDNNAKDLYNLSFMSPYYMHEDGEESPFI
CSTIINGMLKCTDVPHYKEGEMECNLNASLGHTLSGPDTRNGCVNWNQYYSVCQAGELNP
HKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLC
LVVIATQFSETKQRENQLMQEQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKVKRR
AYRIYHGWQSKRRKKVNPNSGALPGGGGANGHGRKKSGGHWARSVHNLVQHHQHHHCHLS
NGSPSPQAIAESTDVLEMRFITSGVQLTVPSQSPAGLDLSPGHQSVHSIFQGDFHEAPQI
CTGTTAGVTPLGRLNGGMNYPTILPSFICSYTGSNVTAKGRIEANNSTADMVDPFEKLQH
FTGEHSHRRLMLQMAGVEPTSLLFEVLGCPYCAQALENIDLDLADSECSQSEGEVVHEFS
HRGRFRIGHSHHHKRLEERSRLTRCWEDFRDRMKRIVDSKYFNRGIMIAILINTLSMGIE
YHEQPDELTDVLEISNIVFTSMFVLEMIFKLMAFGMFGYIKNPYNIFDGIIVVISVWEII
GQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILG
MHLFGCKFSLKLENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPLAAL
YFVALMSFGNYVLFNLLVAILVEGFQAEGDATKSDADEEKRSVNFEEEEKMGELRATAEL
KMYSLMMSANGHVDARGNLPPPIIMRTAATPMPTPKSSLGTDSIFSLGESRRGSGISIDP
IAYDQRSLASPRKSPCHPCSSSSNWGSRRSSWNGLSRAPSLKRKDTSGERESLLSGEGRG
SFEDEEPEGIMLQKAGSASGGSLHHPSSLDFPELPTLPSLCPSGEYHDCNGRALHVSTEL
PSELSREDSTTEEDLDDSFCFRLKRVLDAYKPKWCKTHEDWSLYIFSPRNRFRMFCQRII
SHKMFDHVVLVFIFLNCITIALERPHIQSNSPERLFLSISNYVFTVIFVAEMTVKVVALG
FYSGKHSYLQSTWNVLDGVLVFVSLIDILVSLASTGGNKIFGILRVLRLLRTLRPLRVIS
RAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTRNITNKS
DCLQANYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWM
LLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRLRLLEKRRRKAQQR
PYYADYSPARLYIHTLCTNHYLDLFITFVICINVVTMSIEHYNQPMYLEEALKYCNYVFT
VFFILEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIKMNASLPINPTIIRIM
RVLRIARVLKLLKLATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECT
DSNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECTPEDKQCLSYLPLVSP
IYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMEMARRLSNVSAMS
SGGQEGRGTYMGPRPHSPGQDEQMQRTQENLLSPRKMSVSRMHSLPNDSYMFRPVRPASA
PYPLQEVEPTQAYLELGSVTSIHSQPCEGHSLLQVPGVHPQPHISICMPRIPTPKSSPLH
VVGRPLRRQEAIKNDSIDVQMCDSKGNPDKHIRSTRASVILPVPQISALSSPLVSPFLPR
YCHMPSVCTLQHPHHQRIIPPQPPSRASSSPSDSMLDSADPADEEVHHINSSARLWAGVP
AEGRCHSLSPYVTPWPLPVKNCTSATNLTDYSTKDKDFKFFSVDTRGFLDKPSVSEDYRR
HSIEICSSVENSAFDQGVGEKRYLPTRGQSLHIPRKKKMSPPCISVEPPLETELPPSLVS
MKKLSESTLLRRRTPSYELALQRDSLDFLEHQLPSQPLIKVERQPSHCGEYLSLPRFPFH
QSDSSSCILRESNPSAQPPRYDSALEESTDFSTVNRTAQ
NT seq
6960 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggcgaagggagagagcgctttcaatacctggagagtggcgaggtgagagtt
ccggtggcggccttgtaccgggcgcacggtcatggccatgctgctgaggatgaggagaaa
ggcagcacatggggcccggatggctctgaaggctctaacagctctgaaactcggggctcg
gctgatggtggtggtgatgcccctgctccggatggtgcgtctgaggagcaggagcagcag
ccgtaccctgcgctcgcgcctgtcgtctttttctgcgtcaaacagaccacgcggccgcgg
agctggtgcctccgggtggtttgtaacccctggttcgagcatgtgagcatgctggttata
cttctgaactgtgtgaccctgggtatgttccagccctgcgaggacgtcaagtgccagtct
gagtggtgtgtaatccttcaggcatttgatgactgcatctttgccttttttgctgtggag
atggttatcaagatgatggctctggggatttttggatctaagtgttaccttggagacaca
tggaaccgcctggacttcttcattgtcatggctgggatgatggagtactcactggatggt
cacaatgccagcctgtcagccatccggactgtgcgtgtgctcaggcctctacgagccatc
aacagagttcctagtatgaggatactggtaactctgctcctagatactctgcctatgtta
ggcaatgtcctcctgctgtgcttttttgtgttctttatattcggcattgttggggtgcag
ctgtgggctggtcttctaaggaacaggtgtttcctggacaacaacgcgaaggatctgtat
aatctgtccttcatgagtccatattacatgcatgaggacggggaggagagcccatttatc
tgctccactataattaacggcatgctcaagtgcaccgatgtgccccattacaaggagggt
gagatggagtgcaatctaaatgcatcccttggacacaccttgtctggccctgataccagg
aatggttgcgtgaactggaaccagtactacagtgtgtgtcaggccggggaactcaaccct
cacaaaggggctgtgaactttgacaatattggatatgcttggattgctattttccaggtt
atcactttggagggatgggtagacatcatgtattatgttatggatgcccattccttttac
aattttatatattttatattgcttattatagtgggttctttcttcatgatcaatttgtgc
ctggttgtgatcgcaacccagttctcggaaactaagcagcgagagaaccaactgatgcag
gaacagcgtgcgcgctacatgtccaatgacagcacactggccagctactcggagcctggc
agctgttacgaggagatgctcaggtacattagccacttgtaccgtaaggtgaagcgccgc
gcataccggatctaccatggctggcagagcaaacgcaggaagaaggtcaaccccaacagt
ggcgccttgccagggggtggaggggccaacgggcatggcaggaagaagagtggtggacac
tgggcgcgttctgtccacaatcttgtccagcaccaccagcaccaccactgtcacctcagc
aatggcagcccaagccctcaggccatagcagagagcaccgatgttctggagatgagattt
atcacgtcgggagtacagctgacggtgccctcacaatcacctgctgggttagatctttca
ccaggacaccagtcagtgcatagcatctttcaaggtgactttcatgaggccccacagatt
tgcacaggcactacagctggtgtgactcctctagggagacttaatgggggcatgaactat
cctaccattttgccatccttcatctgcagctatacaggcagcaacgtcacagccaaaggt
agaatcgaggccaacaacagcacagcagatatggtggatccgtttgagaaactacagcat
ttcacaggagagcacagtcacagacgcttgatgctgcagatggcaggcgtagagcccact
tccctgctctttgaggttctcgggtgcccatactgtgcccaggctttggagaacattgac
ctagacttggctgactctgaatgctcccagtctgaaggcgaggtggtacatgagttttcc
cacagaggaaggtttagaatcggacactctcatcaccacaagaggcttgaggagcgcagc
cgattgacaagatgctgggaggacttcagagacaggatgaaacgcatagtggatagcaag
tactttaaccgtgggattatgatcgccatcctcatcaacacattgagcatgggaatagag
tatcatgagcagcctgacgaactgacagatgttctggagattagcaatatcgtctttacc
agcatgtttgtccttgagatgatcttcaagctgatggcctttggcatgttcggctatatc
aaaaacccatataatatctttgatgggatcattgtggttataagtgtatgggagattatt
ggacaggctgatgggggtctttccgtgctcaggacctttcgtctcttgcgtgtgctcaag
ctagtgcgcttcctaccggctctccggagacagctggtggtcctgatgaagacaatggat
aatgtggccaccttctgcatgctgctcatgctcttcatcttcaccttcagtattcttgga
atgcatctgtttggctgcaaattcagcctgaagttggagaatggagacaccatcccagac
aggaagaactttgactctctgctgtgggccatcgtcactgtgtttcagatactaactcaa
gaggactggaatgtggtcctctataatggaatggcttccacctctccactggctgcactt
tactttgtggccctgatgagctttgggaattacgtcctatttaaccttctggtagccatc
ttggtggagggctttcaagcagagggagatgccaccaagtctgacgcagatgaggagaag
aggtcagttaattttgaagaggaggagaagatgggcgaattacgtgccacagcagagttg
aagatgtactctctgatgatgtctgcaaatgggcatgtggacgcgcgtggtaatttgcct
ccaccgatcatcatgcgcacagccgcaactcctatgcccacaccaaagagctctcttggc
acagactccatcttcagtttaggggaatcaaggcgtggcagtggcatttccattgatcca
attgcttacgatcagagatcactggctagcccacgtaaatcaccctgccacccttgtagt
tcaagtagtaactggggaagccgcaggtcaagctggaacggcctgagtcgggcaccaagt
ctaaagcggaaagacacatctggcgagagggagtctctgctctcgggtgagggcagaggc
agctttgaggatgaggagccagagggaatcatgttgcaaaaagcaggaagtgccagtggt
ggctctctgcaccaccccagttctctggacttccctgagctgcccacactccccagtctg
tgcccatcaggagagtaccatgactgcaatggcagggcattacatgtgtccacagagctg
ccctcagagctgagccgtgaagactccaccacagaggaggatctagacgatagtttctgt
tttcgtctgaagagggtgctggatgcgtataaacccaagtggtgtaaaactcatgaggac
tggtctctctatatattctctccaaggaacaggtttcgcatgttttgccagaggatcatc
tctcacaagatgtttgaccatgtggtcttagtctttatcttccttaactgcatcactatt
gctctggagaggccacacattcagtccaatagcccagagcgattgttcctcagtatttcc
aattatgtattcactgtgatattcgttgctgaaatgactgtgaaggtggtggctcttggc
ttctattcaggaaagcatagttatctgcagagcacctggaacgtgttggatggagtgttg
gtgtttgtttcactcattgacatcctggtgtccctggcatctactggagggaacaagatc
tttggcattctgagggttctacgtctgctaaggacactgaggcctttaagagtgatcagt
cgtgctcctggactcaagctggtggttgaaactttgataacatcactgaggccgatcggg
aacatagtactgatctgttgcgctttcttcattgtctttggcattcttggagttcagctc
ttcaaaggcaagttttaccactgtgaaggtttggacacaagaaacatcacaaataaatca
gattgcctacaagccaactacaaatggattcggagaaagtacaactttgataatttgggg
caggctctcatgtcgctgtttgtgctatcttgtaaggatggctgggtgaatattatgtat
gatggcctggatgctgtaggtgtggaccaacagccggtacgtaaccacaacccctggatg
ctgctttatttcatctccttcctgctgattgtgagcttcttcgtgctgaacatgttcgtg
ggtgtggtggtggagaacttccacaagtgtcggcaggaccaggaagaagaggaggcgcgc
ctgcgtgaggagaagaggctgcgtttgctggagaaaaggcgcaggaaagcacagcagcgg
ccctactacgcagattactcaccagcccggctctacatccacacactgtgcactaaccac
tacctggacctctttatcaccttcgtcatctgcatcaacgtagtcaccatgtccatagag
cactacaaccagcccatgtacctagaggaagcattgaagtactgcaactatgtcttcact
gtcttcttcatcttagaggcccttctcaaactcgtggcttttggattccgaagattcttc
aaagacaggtggaaccagttagatctggccattgtgcttctgtccatcatgggcatcacg
ctggaggagatcaagatgaacgcttcccttccaatcaaccccactatcatccgtatcatg
agggttttgagaatagctagagtgctgaagcttttgaagttggctacaggcatgagagca
ttgctggacactgtgatgcaggctctaccacaggttggaaatctgggcttgctgtttatg
cttctcttcttcatttatgctgcactcggcgtagagctctttgggaaattggaatgcact
gacagtaacccgtgtgaaggactcagtcgacatgccacatttgagaactttggaatggcc
tttctaaccctcttcagagtttcaactggtgacaactggaacggtataatgaaggacact
ttaagggagtgcacaccagaagataagcaatgcctgagctacctgccattggtatcgcct
atatactttgtcacctttgtgctgatggcccagtttgtgctggtgaacgtggtggtggct
gtgctgatgaagcacctggaggagagcaataaggaggccaaggaggatgccgagatggat
gcagagattgagatggagatggaaatggcccggcgtctcagtaacgtctcagcaatgagc
tctggtggacaagagggcaggggcacctatatggggccaaggccacattcacctggacag
gatgagcaaatgcagagaactcaggagaatttgctatctccacgaaagatgtcagtgtcc
aggatgcactctttgcctaatgacagttacatgtttcgcccggtgagaccagccagcgca
ccataccctctgcaggaagtggagccaactcaagcatacctcgaattaggctcagtgacc
tcgatccactcacagccatgtgaaggtcattccttgctccaggttcctggtgttcatcct
cagccccatattagtatttgcatgcctaggatccccactccaaagtcatcacccctgcat
gttgtaggcaggcctctacgtagacaggaggcaatcaagaatgactcaatcgatgtgcaa
atgtgtgactccaaaggcaacccagacaaacatattagaagtacaagagccagcgtcatc
ctcccggtgccgcagatctccgccctcagcagccccctggtgtctcctttcctcccccgt
tattgccacatgcccagtgtctgcaccctccaacaccctcaccaccagagaattattccc
ccccaaccacccagtcgggccagcagcagccccagcgactccatgttggactcggccgac
ccagccgatgaagaggtgcaccatatcaacagctcagccaggctgtgggcgggagtccca
gcagaagggcggtgccactcgctgtccccctatgtcacaccgtggccgttgcctgtgaag
aactgtaccagtgccaccaatcttaccgactacagcactaaagacaaggacttcaagttc
ttcagtgtggacaccaggggatttttggacaagccctccgtttccgaggattatcgacgg
cactccattgagatttgctcttctgtggagaacagtgcatttgaccagggagttggtgaa
aagaggtacctgcccacacgtggacaatcattgcacatccccagaaagaagaagatgagt
cctccttgtatctctgtcgaacccccgctagaaaccgagctcccgccgtctctcgtgtcc
atgaaaaaactgtctgagagcacgctactgcgcagaaggacgccatcttatgaactggcc
ctacagcgcgactctctagacttcctggagcaccaactccccagtcagcctctcatcaaa
gtggagaggcagccctcacactgtggcgaatatctctctctcccacggttcccctttcac
cagtcagactccagttcctgcatcctgcgtgaaagcaacccatccgcacagccccctcgc
tatgacagtgcactggaggagtccacagatttcagcacagtaaacaggactgctcaatga
DBGET
integrated database retrieval system
