Pangasianodon hypophthalmus (striped catfish): 113539178
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Entry
113539178 CDS
T05759
Name
(RefSeq) heat shock cognate 71 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040
Spliceosome
phyp04010
MAPK signaling pathway
phyp04141
Protein processing in endoplasmic reticulum
phyp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113539178
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113539178
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113539178
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113539178
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113539178
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113539178
03009 Ribosome biogenesis [BR:
phyp03009
]
113539178
03110 Chaperones and folding catalysts [BR:
phyp03110
]
113539178
04131 Membrane trafficking [BR:
phyp04131
]
113539178
03051 Proteasome [BR:
phyp03051
]
113539178
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113539178
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113539178
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
113539178
Spliceosome [BR:
phyp03041
]
Complex B
Other components
Prp19 complex
113539178
Complex C
Prp19-CDC5 complex
113539178
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113539178
Chaperones and folding catalysts [BR:
phyp03110
]
Heat shock proteins
HSP70 / DNAK
113539178
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
113539178
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
113539178
Proteasome [BR:
phyp03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
113539178
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
113539178
Exosome [BR:
phyp04147
]
Exosomal proteins
Proteins found in most exosomes
113539178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
113539178
NCBI-ProteinID:
XP_026790567
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MSKGPAVGIDLGTTYSCVGIFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
MNPNNTVFDAKRLIGRRFDDPVVQSDMKHWPFKVVNDGGKPKVEVEYKGEMKTFYPEEVS
SMVLTKMKEISEAYLGKTVTNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAA
IAYGLDKKVGCERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMVNH
FIAEFKRKFKKDITGNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGADFYTSITRA
RFEELNADLFRGTLEPVEKALRDAKMDKTQIHDIVLVGGSTRIPKIQKLLQDFFNGRDLN
KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNILGKFELTGIPPAPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAERYRAEDDVQREKVTAKN
TLESLAFNMKSTVEDEKLKDKISAEDKQTIVDKCNEVITWLDRNQTAEKDEYEHQQKELE
KVCNPIITKLYQGTGGMPGGMPGGSGGFPGGTGGSASSGPTIEEVD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggtccagcagtaggcattgacttgggcaccacctactcatgcgttggcatt
tttcagcatggcaaggtggagatcattgccaatgatcaaggaaacagaactacccccagt
tatgttgccttcacagacacagagagactgattggagatgctgccaagaaccaggtggcc
atgaaccctaacaacactgtgtttgatgccaagcgcttgattggtcggcgatttgacgac
cctgtggtgcagtcagacatgaagcactggccttttaaggtggtgaatgatggaggcaaa
cccaaagtggaggtggaatacaagggagagatgaagaccttttatcctgaagaggtgtcc
tctatggtcctcactaagatgaaggagatttccgaggcttacttgggcaaaactgtgaca
aatgctgttatcacagtacctgcctacttcaatgactcccaaaggcaagccacaaaagat
gctggtgccattgctggcctgaatgtccttcgcatcatcaatgagccaacagcagcagcc
attgcctatgggctggacaaaaaggttggttgtgaacgtaatgttctcatttttgacctg
ggtggtggcaccttcgatgtgtccattctgaccattgaggatggcatctttgaggtcaag
gcaacagctggtgacactcatcttggaggtgaagattttgacaaccgtatggtcaaccac
ttcatcgctgaatttaaacgtaaattcaagaaggacatcacaggtaataaacgtgcagtg
cgtcgtttgaggacagcttgtgaacgtgccaagcgcacactgtcctccagcacacaggcc
agcatcgagatagactcactttatgagggtgccgacttctacacctccattacgagggcg
cgctttgaggagctcaatgctgacctgttccgtggtactctagagcctgttgagaaggcc
ttgcgtgatgccaagatggacaagacccagattcatgacattgtccttgttggagggtcc
actcgcattcccaagatccagaaactactgcaagactttttcaatggacgtgatctcaat
aagagtattaaccctgatgaagcagtggcctatggagcagctgtccaggcagcaatcttg
tcaggtgataagtcagaaaacgtccaagatcttcttctgctggacgtcactcctttgtct
ctggggattgagacagctggaggtgtcatgactgtgctcattaagaggaatactaccatc
cctaccaaacaaacccagacctttacaacctactcagacaaccagcctggtgtgctgatc
caggtatatgaaggagaacgagccatgacgaaggacaacaacattctaggcaaatttgag
ttgacaggtattcctcctgccccccgaggtgtgccacagatcgaagtgacctttgatatt
gatgccaatggcattctcaacgtgtctgcagtggacaagagcactggcaaggagaacaag
ataactatcactaatgacaaaggccgtctgtccaaggaggacattgagcgaatggtgcag
gaggctgaaagataccgtgcagaggatgatgttcagagggagaaagtcacagccaagaac
actcttgagtccctggcctttaatatgaagagcacagtagaggatgagaagctcaaagac
aagatcagtgctgaagacaagcagacaattgtggacaagtgcaatgaggttattacctgg
ctggacaggaaccagaccgcagaaaaggatgagtatgagcaccagcagaaagagttggag
aaagtgtgtaatcccataatcaccaagctttaccaaggcactgggggtatgccaggtgga
atgcctggtggctcaggtgggttccctggaggtacaggtggtagtgcttcctctggcccc
accattgaggaggttgactaa
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