KEGG   Pangasianodon hypophthalmus (striped catfish): 113542451Help
Entry
113542451         CDS       T05759                                 

Gene name
setdb1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    113542451 (setdb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phyp03036]
    113542451 (setdb1)
Enzymes [BR:phyp01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     113542451 (setdb1)
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     113542451 (setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    113542451 (setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537
Motif
Other DBs
NCBI-GeneID: 113542451
NCBI-ProteinID: XP_026795806
LinkDB All DBs
Position
Unknown
AA seq 1226 aa AA seqDB search
MEVDAGLGSALDMELGPELEEELGVSLDELRRWIEEQVDSSEVVLNRKAQLAEMQNWVEQ
KEKDMASMDTLCSNASESVIQCEVLVKELYTNIGLEYRESSSEDEGVGGGNASEVIEIDD
DEDDDDDDDDDDDDDDDVIAVGCVVPPKNVTPVKDSLMEASAALQRSTQQVQNLMQTVSK
PTPSTAITPTKGLAPPSPSRGSMLNIPAVFMSSGPAHAPTQPNPALKQDVMRLNMSILGK
KRTKTWHRGTLIAINSVGSGFKYKVKFENKGKSLLSGNHVAFDYHPTLERLYVGARVVAK
YKDGNQVWLYAGIVAEMPNSKNRMRFLIFFDDGYASYVALPDLYPVCRPLQKTWEDIEDE
SCRDFIEEYITAYPNRPMVLLKPGQIIKTEWEGTWWRSRVEEVDGSLVKMLFLDDKRSEW
IYRGSTRLEPMFNLKMSTANNQEKKLAGQQRVRPNMGAMRVKGPVVQYTNENNLLANRSA
VTQPTPPRPQLTAPSQPIRTETQMAKKSTSPYVPTARQIVTTDLQLKTVGILPQNTSSRL
FFLQSGPVQNLTPIAPAPQTLPPAITTMSAISTISPYASERIPQEPSYQAPNDRLFYMTH
ICTPECLKRIRPTRPNLHRGRNPLLTPLLYEFRRMTARRRLNRKMSFHVIYKSPCGLSLR
NMAEIQRYLFQTHCDFIFLEMFCLDPYVLVDRRFQPQRPFYFIRDITGGREDIPLSCVNE
IDNTPPPSVAYSKERIPEDGVFINTSLEFLVGCDCTDGCQDKSKCSCHQLTLQATGCTPG
GQINPNAGYNYKRLDECLPTGIYECNKQCRCNPQMCTNRLVQHGLQVRLQLFKTQNKGWG
IRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHC
SDSEGSGVDMSRVKMSSSQQGKNGPKTEDRNVSSKGQDSSDEGESDDDKDESNGDESDSS
DDTFVKDTYFSSSSVWRSYTTRRQAKGMKEESQDSKDGLSMSAGGTEDRKPPPVPEECGK
SKVASWLTSQSSSTGPPNVKIEGGMKTEKKEVMTLSDSDDVQTISSGSDDNKEREKKTQA
VVKRQVAVKSTRGIALKSSHSMMVKTGGGGTGGSAAHQGHGGGAGDSGSKSTRQFFDGEE
SCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDY
NYEVGSVEGKELLCCCGSTECRGRLL
NT seq 3681 nt NT seq  +upstreamnt  +downstreamnt
atggaggtggacgcaggtttgggctcggctctggacatggagctggggcccgagctggag
gaggaacttggcgtttctctggacgagctgcgcaggtggattgaagagcaggtggacagc
agtgaggtcgtgctgaacaggaaggcccagttagccgaaatgcagaactgggtcgagcag
aaagaaaaggacatggccagtatggatacactctgctccaacgcctcagagtctgtaata
cagtgtgaagttctagtgaaagagctttacactaacataggtctggagtatcgggagagc
agctctgaagatgaaggagtaggtggcggcaacgcatccgaggtcatcgaaattgatgac
gatgaagatgatgacgatgacgacgacgatgatgatgatgacgacgatgatgttattgcc
gtgggctgtgtggttccaccaaagaacgtaacaccagtcaaagactcgcttatggaagca
tcagctgcacttcagagatccacacagcaggtgcagaacctgatgcagacagtcagcaag
ccgacgccgtccacggccatcacgcctactaaaggactggcccctccctctccgtcccgg
ggctccatgctgaacattccagcagtgttcatgtcttcaggccctgcacacgcacccact
cagccaaatccagctctaaagcaggatgtcatgaggctaaacatgagcattctgggtaaa
aaacgcaccaagacctggcaccgtggaactctgatcgctattaactcagtgggcagcggc
tttaagtacaaggtgaagtttgagaataaagggaaaagcctgctgtctgggaaccatgtg
gcattcgactatcacccaaccctggagaggctgtacgttggtgctcgtgttgttgccaaa
tataaagatggcaaccaggtgtggctgtatgctggcatcgttgctgaaatgcccaacagc
aagaatcgtatgaggttcctgatcttttttgatgatggctatgcttcttacgtagccctg
ccagatctctaccctgtttgcagacccttgcagaagacgtgggaggacattgaggatgag
tcatgcagggatttcattgaggagtacatcacggcatacccgaacagacccatggtgctg
ctgaagccgggtcagatcatcaaaaccgagtgggaagggacgtggtggaggagccgcgtg
gaggaagtggacggcagccttgtcaaaatgctcttcctggatgataagcggagtgagtgg
atctatcgtggctcgactcgcctggagcccatgttcaacctaaaaatgagtacagccaac
aaccaggagaaaaagctggctggccagcagcgcgtgcggcccaacatgggagctatgagg
gttaaaggccctgtggtgcagtacacgaatgaaaacaacttactagccaaccgctccgca
gtcacccagcctacaccacctcgcccacagcttactgctccctcccagcccatccgcact
gagactcagatggctaaaaagagcacgtccccgtatgttcctaccgctcgtcagattgtt
accaccgacctccagctcaaaactgtcggcatccttccccaaaacaccagctccagactc
ttcttcctgcagtcagggccagtgcagaacctgacacccatcgctccggctccccaaacc
ttgccacctgccataactaccatgtctgccatatctaccatatctccctatgcgagtgag
cggattcctcaggagccgtcctatcaggcccctaatgatcgcctcttctatatgacacac
atctgcacacccgagtgtctgaagcgcatccggcccacgcgacccaatctccaccgggga
cgaaacccactcctcaccccgctgttgtacgagttccgccgcatgaccgcacgccgccgc
ctcaaccgcaagatgtcttttcatgtgatctacaagtccccatgtggcctgagcctgagg
aacatggcggagattcaacgctacctcttccaaacacactgtgacttcatcttcctggaa
atgttctgtctggacccgtatgtcctggtggaccgccgcttccagccacagaggcccttc
tacttcatccgggacatcacaggtggacgtgaggacattccactgtcctgcgtcaatgag
attgataacactcccccacccagcgtggcttacagcaaagagcgcatccctgaggacgga
gtcttcatcaacaccagcctcgaattcctggtgggctgtgactgcactgacggctgccag
gacaagtcgaagtgttcatgccaccagctgaccctgcaggccacagggtgtactcccggt
ggacagatcaatcccaatgctggctacaattacaagagactggatgagtgcttacctact
gggatatacgagtgtaacaagcagtgtcgctgtaatcctcagatgtgcactaatcgcttg
gtgcaacacggcctccaagtgcgcctgcagctctttaagacccagaacaagggctggggc
atccgctgcctcgatgatgtggccaaaggctcttttgtctgtatctatgcagggaaaatc
cttacagacgactttgcggacaaggagggtttggagatgggtgatgagtactttgctaac
ctggaccatatcgagagcgtggagaactttaaggagggctacgagagtgaggcgcactgc
tcggacagtgagggcagcggtgtagacatgagtcgggtcaaaatgtcttcatcccagcag
ggcaaaaatggccccaagacagaggaccgcaatgtcagcagcaaaggccaagattcttct
gatgagggtgagagcgatgatgacaaagatgagtcaaacggtgatgagagcgatagctcg
gatgacaccttcgttaaggacacttacttttcctccagctcagtgtggaggagctacacg
actcgccgacaggccaaaggcatgaaggaagagagtcaggacagtaaggatggactgagc
atgtcagctggaggaacagaggacaggaagccgccccctgtgccagaggagtgtgggaag
agtaaagtggcctcatggctgaccagccagtcctcctccactggaccaccgaatgtcaaa
atagagggaggaatgaagacggagaagaaggaagtgatgaccctctctgacagtgacgat
gtgcaaactatcagctctggctccgatgacaacaaagagcgtgaaaagaagactcaggcg
gtggtgaagaggcaggtggcagtgaaatcgacacgaggcattgctttaaagtcctcgcac
agcatgatggtgaaaacaggaggtggtggaactgggggctcggcagcccatcagggccat
ggaggcggtgccggagacagtggttccaaaagcacacggcagttctttgatggggaggag
tcttgttacatcattgatgccaagctggagggaaaccttggacgctacctcaaccatagc
tgcagtcctaacctgtttgtccagaatgtgtttgtggacacacatgacttgcgatttcca
tgggtggccttcttcgccagcaagagaatccgtgcagggacggagctgacatgggattat
aactatgaggttgggagcgtggaaggaaaagagctgctctgctgctgtggctccactgag
tgccgaggacgactgctctaa

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