Pangasianodon hypophthalmus (striped catfish): 113543105
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Entry
113543105 CDS
T05759
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03271
Virion - Rotavirus
phyp04145
Phagosome
phyp04510
Focal adhesion
phyp04512
ECM-receptor interaction
phyp04514
Cell adhesion molecules
phyp04530
Tight junction
phyp04810
Regulation of actin cytoskeleton
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
113543105
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113543105
04514 Cell adhesion molecules
113543105
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113543105
09144 Cellular community - eukaryotes
04510 Focal adhesion
113543105
04530 Tight junction
113543105
09142 Cell motility
04820 Cytoskeleton in muscle cells
113543105
04810 Regulation of actin cytoskeleton
113543105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113543105
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113543105
04515 Cell adhesion molecules [BR:
phyp04515
]
113543105
04090 CD molecules [BR:
phyp04090
]
113543105
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113543105
Exosome [BR:
phyp04147
]
Exosomal proteins
Proteins found in most exosomes
113543105
Cell adhesion molecules [BR:
phyp04515
]
Integrins
Integrin beta subunits
113543105
CD molecules [BR:
phyp04090
]
Proteins
113543105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
113543105
NCBI-ProteinID:
XP_026796949
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MKVKVALIAVLLGFFSFCSAQLDGNDCTKASAQSCGECIQVGEKCGWCTYEAFLKQGESK
STRCDETEALIKKGCPQNNVENPRGAVHVNENKTVTNREKDVAEKLKPDQITQIQPQKLT
LSLRAGEPQKFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTDLMREMQSVTSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTEDGHQFNSLVSRQQ
ISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLKDNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIKLIIDAYNSLSSEVILENSKLPEGVSISYVSHCKNGVSETGDNGRKCSNISI
GDEVTFDIAITTKGCPSHGTSEVIKIKPLGFNEEVVIVLNFICECECSKEGIPKSPDCHF
GNGTLECGACRCNEGRIGRVCECSKDDVRAEDLDANCRMDNGTDICSNNGDCICGTCECK
KRDNPEERYEGKYCECDNFNCDRSNNKLCGGHGQCVCRVCVCDANYTGSACDCPLDKQPC
VASNGQICNGRGTCDCGLCKCTDPKFQGPTCEICPTCPGVCTEHKPCVQCRAFKTGEMKD
KCEEKCNYFKLTMVKEKEDLPQPSSQPYLSHCKERDANDCWFFFTYATKNDSVEVYVVEK
LECPTGPDIIPIVAGLVAGIVLIGLALLFIWKLLMIIHDRREFAKFEKEKMNAKWDAQDN
PIYRSPINKFHNPSYGCKSGAL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaggtggcattgatagctgttcttctggggtttttctccttctgttcagct
caactagatggtaatgattgcactaaggcttcagctcagtcttgtggtgaatgtatacag
gttggagaaaagtgtggctggtgcacctatgaagcctttctgaagcaaggcgaatccaaa
tcaacacgctgtgatgaaactgaggctctgattaagaagggttgtcctcagaacaatgtg
gaaaatcctcgaggagcagtccatgtcaacgagaacaaaactgtcacaaaccgtgaaaaa
gatgtggctgagaaactgaaaccggaccagataacacagattcaacctcagaagctcaca
ctgagcctaagagcaggcgagcctcagaaattttccctgaagtttaaaagagcagaggat
tatcccattgacctgtattacttgatggacttgagttactccatgaaagatgatttggag
aatgtgaagaatttgggaacggacctgatgcgtgagatgcagtcagtaacgtctgacttc
aggattggttttggttcgtttgtggaaaagaccgtgatgccctacatcagtacaacccct
gctaagcttctgaatccctgcacttctgatcagaactgtacaagccccttcagctataaa
aatgtacttagtctgactgaggatggccatcaatttaacagcctagtcagccggcaacaa
atttctggaaacctggactcacccgagggaggctttgacgccatcatgcaagttgctgtc
tgtggggaacagattggttggaggaatgtcactcgactactagtgttttccactgatgct
ggctttcacttcgcgggagatggtaaactgggtggcattgtgcttcccaatgatggaaaa
tgccacctgaaggataatatgtacacaatgagccattactatgactacccttcaattgca
caccttgtacagaaactgagcgacaacaacattcagaccatctttgctgtgactgaggag
ttccagcctgtctataaggagcttaaaaatctcattccaaagtcagctgtgggaacattg
tctgcgaactccagtaacgtgatcaaacttatcattgatgcctacaattctctgtcgtct
gaggtgatcctggagaacagcaagctgcctgagggagtgtccatctcatacgtgtcccac
tgcaagaacggagtgagtgaaacaggagacaatggaaggaagtgctcaaacatctccatt
ggtgatgaggtgacctttgacatagccatcaccactaagggctgcccatcacatggtaca
tccgaggtgataaagatcaagccactgggcttcaatgaggaggtagtgattgttctaaac
ttcatctgtgagtgtgaatgttccaaagaaggaatccccaaaagtccagactgtcacttt
ggaaatggaacccttgagtgtggagcatgcagatgcaatgagggacgtattggaagggtt
tgtgaatgtagcaaagatgatgtcagggcagaggatctggatgcaaactgccgcatggac
aatggcacagatatctgtagcaacaacggagactgtatctgtggaacatgtgaatgcaag
aagcgagacaacccagaagagcggtatgaaggcaagtactgcgaatgtgacaacttcaac
tgcgaccgatcgaacaacaaactatgcggaggtcatggtcagtgtgtatgcagagtgtgt
gtgtgtgatgcaaactacacaggcagtgcatgtgactgtcccctggacaagcagccctgt
gtagccagtaatgggcagatctgtaatggtcgtggcacctgcgactgtggactgtgtaaa
tgcaccgacccgaagttccaaggtcccacctgtgagatttgccccacttgtcctggagtc
tgcacagagcacaaaccctgtgttcagtgccgtgcatttaagactggagagatgaaagat
aaatgtgaagagaaatgcaactactttaaactaaccatggtgaaagaaaaggaggatctt
cctcagccaagcagccagccctacctcagtcactgcaaagagcgtgatgccaatgactgc
tggttcttcttcacttatgccaccaagaatgacagtgttgaggtctatgtggtcgagaag
ttggaatgccctactggtcctgacattatcccaatcgtagcgggtttggttgcaggcatc
gttttgattggtctggccctgcttttcatctggaagctgctcatgattattcatgaccgc
agagagttcgcaaagtttgagaaagagaagatgaatgccaagtgggatgcgcaagataat
cccatttataggagtcctattaacaagttccacaatccgagttatggatgcaaaagtggg
gcgctctaa
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integrated database retrieval system
