Pangasianodon hypophthalmus (striped catfish): 113544139
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Entry
113544139 CDS
T05759
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
phyp03012
]
113544139 (dhx29)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113544139 (dhx29)
Translation factors [BR:
phyp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113544139 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
OB_NTP_bind
Helicase_C
HA2_C
AAA_22
ResIII
nSTAND3
HA2_N
AAA_19
NACHT
ATPase
AAA_16
Helicase_RecD
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
113544139
NCBI-ProteinID:
XP_026798594
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
MGGKKKKSAPVSSAAGAPDAAAKKQQHQPQPQLQSQVQLQQQQKTNCSKTKAPKAYSLPS
SSSSPADSSAAAEKSVLKVVIHPDLEKKIVKLINDHRQEHADRGPISGRITSKKLLDLYT
ALQKFGFKTQHIEEAMKSSVLYGGDLHSALDWLCLNLRDDELPEGFSQSLREQENSKSRA
KFQDQQQEKSQAVAQTKSPKHEEQQRAKVKDDGTSMKEWILRYAEQNLEESSEEEEERNG
DGSQSPETDEKFDPNERYLTLTAQLYDAKEMASDAKAKKDKAGQRSAQDRIRLIQQEMKP
LESHPLFNPAIKVTEAPKVEKKPPPVVAGNDELNFNLFEQANQTPAEKPEKTKKELKDIR
DFDYTGRSWTGKSPKQFLIDWCRKNLPKSPAPSFQKIPSGRYWKCKVRIQRPDDVLEVCP
TILTEDGMQAQHLGATLALYNLVKGQSVHQLLPPPYRDVWLEWRDGEQQQEERTRSAINK
PRDQFISRLLARVKQQQPRSEPCPTDPSPSHCTEDSWEALADTEEEEKEDKKKEKEEEEK
SRSLFLQLRGSELALRLLPERRRLPVFQHRVRVLEALQRHRVVVIAGETGSGKSTQIPQF
ILEEVLGKEEEKTGQCNVVVTQPRRISAMSLASRVNQELGSKDQPGSKNSLCGYQIRMEN
RSSASTRLLYCTTGVLLRKLQGDPLLSSITHIIVDEVHERSVQSDFLLTILKDVIHKRSN
LHLILMSATVDCDKFAHYFNRCPVVTIPGKTFPVEVFHLEDIVEETGYVLDQDSEYSQRF
VEEEEEISVSVTQKGGRAVQYQETIVRDPGACWDLGPELDHFSSRTRHALQHMNPNKINM
ELILELLDYLDKSPQFAAIDGAVLLFLPGLAHIQQLYDLLTTDKRFNCKDRYKLVALHST
LSSQDQAAAFTVPPAGVRKIVLSTNIAETGVTIPDVVFVIDTGKTKENRYHEGSQMSSLV
ETFVSKASAVQRQGRAGRVRNGFCFRLYAKTRFNSFIDYSKPEILRVPLEELCLHIMKCE
YGSPEDFLSHALDAPPQQAVCNAVGMLRKIGACQRESYVLTPLGLHLASLPVNAKIGKML
IFGAILGCLEPVATIAAAMSEKSPFSTPMNRKEEANLARDALATANSDHLTIYNAYQGWK
KASRDGLRTEMSYCRKHFLNRTALITIESVKQELVRMVQQTGLCSTSLPSFSKQEVPVVV
AVLSAGVYDNVGRILPVPSILPEERVACTAETPQGKAQVHPSSVNRNLQTHGWLLYQEKV
KYSKVYLRDTTLTSPFPILLFGGDIDVQHRERLVSVDGWIHFQAPVRIGVIFKHLRQLLD
SLLERKLANPKLSLEDEKTIQIILELIKSEKIPR
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaagaagaagaagtcggcgcctgtcagctcagcagctggagctccagatgct
gcagcaaagaaacagcaacatcaaccacaaccacaactacaatcacaagtacagctacag
cagcagcagaaaacaaactgcagtaaaactaaagccccgaaagcctacagccttcccagc
agcagctcctcgccggcagacagcagtgcggctgcggagaaatcagtgctcaaagttgtc
attcatcctgatctggaaaagaaaatcgtcaagctgattaatgatcacagacaggagcat
gcggacagaggaccgatatcaggcaggatcacgtctaaaaagctgctggatctgtacacg
gctctgcagaagttcggctttaagacgcagcacatcgaggaggccatgaagagcagcgtg
ttgtacggaggcgacctccactcagcgcttgactggctgtgtctcaatctcagagacgac
gagctgccggagggattcagccagagtttacgggaacaggagaacagcaagagccgagca
aagtttcaggatcagcaacaagagaaaagccaagcagtggcccaaaccaagagccccaaa
catgaagaacagcaacgagcaaaggtgaaggatgatgggacgagtatgaaggagtggatc
ctgagatacgcagaacagaatctggaggaaagcagcgaggaagaggaggagaggaacgga
gacggatctcagagcccagagacagacgaaaaatttgatcctaacgagcgctatctgacg
ctaacggctcagctgtacgacgcgaaggagatggcctcagacgctaaagccaagaaagac
aaagcaggacagcggagtgcacaggaccgcatccggctcatacagcaagagatgaagccg
ttggagtctcacccgctgtttaacccggcgatcaaagtgacagaggctcctaaagtagag
aaaaaacctcctcctgtggttgctgggaacgacgagctcaacttcaacctgtttgaacaa
gccaatcaaacgccagcagagaaacccgaaaagacaaagaaggagctgaaggacatccgt
gattttgactacacgggtcgcagctggacgggaaagtcgcccaaacagttcctgatcgac
tggtgcaggaagaacctgcctaaaagccctgcgccgtctttccagaaaattccatctggg
agatactggaagtgcaaggtgcgtattcagaggccagacgatgtgttggaggtttgtccc
accatcctgacggaggacggcatgcaggcacagcatttaggagccacacttgctctgtat
aacctggtgaaagggcagtctgtccatcagctcctccctcctccgtaccgggacgtttgg
ttggagtggcgtgatggagagcagcagcaggaggagcgcactcgttcagccattaacaaa
ccgcgagatcagtttatctcccgcctcctcgctcgtgtcaaacagcagcagcctcggtca
gagccctgccccacagacccaagcccctcccactgcaccgaggactcgtgggaagctctg
gcggacacggaagaggaggagaaagaggacaagaagaaggagaaggaagaggaagagaag
tcgcgctcactctttttacagctccgtggctcagagctggcactcaggttgttgccagag
cgccgacggctccctgtgtttcagcaccgtgtgcgagtgcttgaggctctacagcgccac
cgtgtggtggtcattgcgggagagacgggcagcggaaaaagcacccaaatcccccagttc
atcctggaggaagtgctgggaaaagaagaggagaaaacagggcagtgtaacgtggtggtc
actcagccgaggaggatctccgccatgagcctcgctagcagagttaaccaggagctaggg
agcaaggaccaaccggggagcaagaactcgctgtgcgggtatcagatccggatggagaac
cggtccagtgcgtccacacgtctcctctactgcaccaccggcgtcctgctgaggaaacta
caaggagatccactcctctcctccatcacacacatcattgtggatgaggtccacgagcgc
agcgtacagtcagatttcctcctcaccatcctaaaggatgtgattcacaagcgttccaac
ctgcacctcatcctcatgagtgccacggtggactgcgacaaatttgctcattattttaac
cgctgtcccgtcgtcaccattcccggcaagacctttcctgtagaggtttttcacttggag
gacatcgtggaggagacgggctacgtgttggaccaggactctgaatacagtcagagattt
gtggaggaagaggaggagatcagtgtctccgtcacacagaaaggaggaagagctgtgcag
taccaggagacgatcgtgcgggaccccggggcatgctgggatctgggaccggagctggat
cacttcagcagccgaacacgtcatgctctgcagcacatgaaccccaacaagatcaacatg
gagctcatcctggagctgctcgattacctggacaagtcgccccagtttgcagcgatagat
ggcgctgtgctgctcttcttgcctggactggctcacattcagcagctctacgaccttctc
accaccgacaagaggttcaactgtaaggacaggtataagctggtagcgctgcactctaca
ctgtcgtctcaggaccaggccgcagcgtttacagtgccccccgctggagtcaggaagatt
gttctgtctacaaacatcgctgagaccggagtcaccattccagatgtggtgttcgtcatc
gacacggggaaaactaaagaaaatcggtatcatgaaggcagtcagatgagctctctggtg
gaaacgtttgtgagtaaagcgagcgcagtccagaggcagggccgagcaggacgtgtccga
aacggcttctgcttccgtctctacgccaaaaccaggtttaacagttttatcgattactcg
aaaccagagatcctcagagtgccactagaggagctctgtcttcacatcatgaaatgtgag
tacggctcaccagaagacttcctgtctcatgctctggatgcaccacctcagcaggctgtg
tgcaatgctgtgggcatgttgagaaagatcggggcgtgtcagagggagagttacgtactc
acaccgctcggccttcatctcgcctcgctgcccgtcaacgccaagatcggcaagatgctc
atcttcggcgccatcctgggctgtctggagccggttgccaccatagcagccgccatgtcg
gagaagtctccgttctccactcccatgaacaggaaggaggaggccaacctggccagagat
gctttagcaacagccaactctgatcacctgaccatctataacgcctaccaagggtggaag
aaagcgagtcgtgatggtctacgtactgaaatgtcttactgcaggaaacacttcctgaac
cgaaccgctctcatcaccatcgagagtgtgaagcaggaactcgtccggatggtgcagcag
accggcctgtgcagcacgtctctaccctcgttctccaaacaggaagtgccggttgtagtg
gccgtgctgagtgcgggtgtatatgacaacgtagggcggatcctccctgtaccttccatc
ctccctgaggagcgtgtcgcctgtacggcggagacaccgcagggaaaggcgcaggtccat
ccatcctccgttaaccgtaacctccagacacatggctggctgctctaccaggagaaggtg
aaatactcgaaggtgtatttgcgcgacaccaccctcacgtctccgttccccatcctgctg
tttgggggtgacatcgacgttcagcaccgcgagagactcgtctctgtggacggatggatt
cacttccaggccccggtccgaatcggtgtgatcttcaaacacctgcgtcagctcctcgac
tcgctgttggagagaaagctggcgaatcctaaactcagtctggaagatgagaagaccata
cagatcatacttgagttgattaaatcggagaaaattccacgctga
DBGET
integrated database retrieval system
