Pangasianodon hypophthalmus (striped catfish): 113545836
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Entry
113545836 CDS
T05759
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113545836
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113545836
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ
ATP-synt_B
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
113545836
NCBI-ProteinID:
XP_026801261
LinkDB
All DBs
Position
Unknown
AA seq
1928 aa
AA seq
DB search
MAAPLLAPPGPDSFKRFTRESLANIEKRIAEEKKKKPVKPRSDSSHRDDDDNSGPKPNSD
LEAGKSLPFIYGDVPSNLVAEPLEDLDPFYLNKKTFIVLNKGKTIFRFSATPSLYIISPF
NLLRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESLTKIV
ARGFCIDDFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVFWPISNETITYLSNGS
RGFDFEEYIMNDTNFYFLPTGGDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFG
WAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQ
NQATIEEAQQKEEEFKAMLEQLKKQQEEAQANAMATSAGTVSEDAVEDDGGGHLSRSSSE
VSKLSSKSAKERRNRKKKWRKEQEKEKGDSEKVVKSESDDGSKRSRFRFPDNRLGRKTSI
MNQSLLSIPGSPFMSRHNSRSSIFSFKARPRDVGSENEFADDEHSTVEESEDRRGSLFIP
YRRNSYSGYSQGSSRINPLAPHSGCKRNSTVDCNGVVSLIGPGPGRLLPEVKIDKAASDD
NGETTEVDMKRKHSGSLMVSVDQLNTSFGRKERANSAMTVITNTLVEELEESQRKCPPCW
YKFANTFLIWECCPLWLKIKEIVNLIVMDPFVDLAITICIVLNTVFMAMEHYPMTPEFEE
VLSVGNLVFTGIFTAEMFAKLIAMDPYYYFQEGWNIFDGFIVSLSLVELGLADVEGLSVL
RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD
CVCKIASDCDLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVFMMVMVI
GNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWAKVHVRILVAHVL
KKSPLEDEDKPLDDMYDKKLNIIGNHTGVDIKCGELDYAKNGNGTTSGIGSSVGKYMIDE
DRMSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPE
EEEAGAVEVVEEYLDPEPCWTDACVARYKCCDVSITEGWGKHWWYLRKTCYLIVEHNWFE
TLIIFMILLSSGALCNSDVSIVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRV
VVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEEYFEIDDVNNKTE
CFALINANHSEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEYQPKYE
DNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPQNNIQGMVFDFVTQQAFDISIMIMICLNMVTMMVETDDQSQETETILY
WVNFVFIVVFTGEFVLKLFALRHYYFTNGWNIFDCVVVILSIVGMFLADLIEKYFVSPTL
FRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAY
VKREVGIDDMYNFETFGNSMIILFMITTSAGWDGLLAPILNYPPDCNPEKENPGTTVKGD
CGNPSVGIFFFVMYIIVSFLIVVNMYIAIILENFSVATEESADPLCEDDFESFYEIWEKF
DPDASQFITFAKLPDFADTLEHPLRVPKPNIIELIAMDLPMVSGDRIHCLDILFAFTKRV
LGDSGDLDMMRQQMEERFVAANPSKVSYEPITTTLRRKQEEVSAVVIQRAYRAHLTRRGF
VCKRRPANNKLENGGTNQEKKEDTPSTASLPSYDSVTKPEKEKQDDNNEGKGRKEKGRNQ
KDVRESKC
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccgctgctcgcacccccaggccctgacagcttcaagaggttcacccgggag
agtttggccaacatcgagaagcgcatcgctgaggagaagaagaagaaacccgtcaaaccc
cgatccgacagcagtcatcgtgacgatgatgacaacagcgggccgaagcccaacagcgac
ctggaggcggggaagagcctgcccttcatctatggggacgtcccctcgaatttggtggcc
gagcctctggaggacttggaccccttctatctgaacaagaaaacctttatagtgctaaac
aaagggaaaacgatcttccgtttcagtgccacgccctcgttgtatatcattagccctttt
aatctgctcaggcgaatagctattaaaattttgatacattcagttttcagcatgatcata
atgtgcaccattttaaccaactgtgtgttcatgacattcagcaacccgccagaatggtcc
aaacaagtcgagtacacatttacagggatttacactttcgagtctctcacaaagatcgtg
gctcgaggattttgtatagacgacttcacgtttctcagagatccctggaactggctggac
tttatggtcatctccatggcatatataacagagtttgtggacctcgggaatgtgtccgcc
ctgagaaccttcagggttctacgagctctcaaaactatttctgtcataccagggctgaag
accatcgtgggcgctctgatccagtcagtgaagaagctgtctgacgtgatgatcctgacg
gtgttctgtctcagcgtgttcgcgctcatcggcctgcagctcttcatggggaacctgcgg
cagaagtgcgtgttctggccaatcagcaacgagaccatcacctacctgtccaatgggagc
agaggattcgactttgaggaatacatcatgaatgatacaaatttctacttcctgccgacc
ggaggagacgctttactgtgtggaaacagctctgattctggacgctgtccggagggttac
acgtgtatgaaggcaggccgtaaccctaactacgggtacaccagctttgactcgttcgga
tgggcgttcctcgctctcttccgactcatgacacaggacttctgggaaaatctgtaccag
ctgacccttcgagctgcaggaaagacctacatgatcttcttcgtgctggtgatctttgtg
ggttccttctacctggtgaatctgatcctggctgtggtggccatggcctatgaggagcag
aaccaggccaccattgaagaggcccagcagaaagaggaggagtttaaagccatgttggag
cagctcaagaaacagcaggaggaggctcaggccaacgccatggccacgtctgcagggacg
gtatctgaggatgctgtggaggacgacggaggtggacatctgtcccgcagctcctctgag
gtgtctaagctgagctccaaaagtgccaaggagcgacggaacaggaagaaaaagtggagg
aaagagcaggagaaggagaaaggagacagtgagaaagtggtcaaatccgagtcggatgat
ggcagcaagaggagtcgcttccgtttccctgacaaccggctgggcaggaagacctccatc
atgaaccagtctctgttaagtatacctggctcgcccttcatgtcccgccataacagtcgc
agctccatcttcagctttaaggcacgtccgcgggacgttggctctgagaacgagtttgcg
gatgatgagcacagcacggtggaggagagcgaagaccgccgaggttccctcttcatcccg
taccggcgcaacagctacagcggttacagtcagggctcatcacgcatcaacccgctggct
ccacactcaggctgcaagaggaacagcacggtcgactgcaacggcgtggtgtctctgatc
gggcccgggcccggacgccttctgcctgaggtgaaaatagataaggcagcctctgacgac
aatggagaaacaaccgaggtggacatgaagaggaaacactcagggtctctcatggtgtcc
gtggaccagctgaacacgtcgtttggacgtaaagagcgagcgaacagtgcgatgaccgtc
atcactaacacactagtggaggagctggaggagtctcagagaaagtgtcctccatgctgg
tacaagtttgccaacacgtttctgatctgggaatgttgtccactctggttgaagattaag
gagatcgtcaatctgatagtgatggacccgtttgtggatttggccattactatatgtatc
gtgctgaacaccgtgttcatggcgatggagcactaccccatgacccctgaatttgaggaa
gttctgtctgtaggaaatctggttttcacgggtattttcacagccgagatgtttgcgaag
ctgatagcgatggacccgtattactacttccaggagggctggaacatatttgatggcttc
atcgtgagcctgagcttggtggagttggggctcgctgatgttgagggattgtcagtgctg
agatccttcagactgctgagggtcttcaaactggcaaagtcatggcccactctgaacatg
ctgatcaagatcatcgggaactctgtgggtgctctgggaaacctgaccctggtgctggcc
atcatcgtcttcatcttcgccgtggtgggcatgcagctgtttgggaagagctacaaggac
tgtgtgtgtaaaatcgcctcggattgcgacctgccgcgctggcacatgaacgacttcttc
cactccttcctgattgtgttccgtgtgctgtgtggagaatggatcgagaccatgtgggac
tgcatggaggtggcgggacagaccatgtgcctcatcgtcttcatgatggtcatggtcatt
ggaaacttagtggtgctgaatctgttcctggctctgctgctcagctcgttcagtgctgat
aatttggctgccactgatgatgacggggagatgaacaacctgcagatctcagtgatccgg
attaaaaagggtattgcctgggccaaagtccatgtgcggatcctggtggctcacgttctg
aagaagtcgcctctggaggatgaggacaagcctttggatgacatgtatgacaagaagctg
aacatcattggcaaccacacgggagtggacatcaaatgtggcgagctcgactacgccaag
aacggcaacggcaccaccagcggcatcggcagcagcgtggggaagtacatgatcgacgag
gaccgcatgtccttcatccacaatcccaatctgactgtgcgtgtccctatcgccgtcgga
gagtcggactttgagaacctgaacacggaggacttcagcagcgaatcggatgtggagaac
agcaaagatttggatgatacgagctcgtcggagggcagcactatagacataaagccggag
gaggaggaggcgggggcggtggaggtggtggaggagtatctggacccggagccgtgctgg
acggacgcctgtgtggcgcggtataagtgctgtgacgtgtccatcactgagggttggggg
aaacactggtggtacctgaggaaaacctgctacctcatcgtagaacacaactggttcgag
acactcatcatcttcatgatcctgctcagctctggagctctgtgtaatagcgacgtgtct
atagtcagccttatagctaatgcgctggggtactcagacttgggccccattaagtccctg
aggactttgcgggccctcaggcccctgagagctttgtcccggtttgagggaatgagggtt
gtggtgaatgcgctggtgggtgccatcccatccatcatgaacgtgctgttggtgtgtttg
atcttctggctcatcttcagtattatgggggtgaacctgttcgccggaaagtactactac
tgctttaacgaaacgtcagaggaatatttcgagattgatgacgtcaacaacaagacggaa
tgttttgcactcatcaatgcaaatcacagtgaggttcgctggaaaaacgtcaagatcaac
ttcgataacgtgggcgctggatatctggcgctcttacaagtggccacgtttaaaggttgg
atggacatcatgtacgcagctgtggattcccgaaaggttgaatatcaaccgaagtatgaa
gataatctgtacatgtacatctatttcgtcatcttcatcatctttggctcattctttaca
ctcaatctcttcattggtgtcatcatcgacaacttcaaccagcagaagaaaaagttcgga
ggtcaggatatcttcatgacagaagaacagaagaagtattataatgctatgaagaaactg
ggctcgaagaaaccacagaagcccatccccagaccacagaacaacatccaagggatggtg
tttgacttcgtcacgcaacaggccttcgacatctccatcatgatcatgatctgtctcaac
atggtcacaatgatggtggagacagatgaccagtcacaagagacggagaccattctgtac
tgggtcaacttcgtcttcatcgttgttttcactggcgagtttgtgctgaagctctttgca
ctacgacattactacttcaccaacggctggaacatcttcgactgcgtggtggtgattctc
tctattgtgggtatgttcctggcagacctgatcgagaagtactttgtgtcacctactctg
ttcagggtgatccgtctggctcgaattggtcgtatcctgcgtttaatcaaaggagccaag
gggatccggaccttactgtttgccttaatgatgtcacttcctgccctgtttaacattggc
ctgctgcttttcctggtcatgttcatcttctccatatttggtatgtccaactttgcgtat
gtgaagcgggaggtcggcatcgacgacatgtacaactttgagacgtttggaaacagcatg
atcatcttgttcatgatcaccacgtcggcagggtgggacggtttgcttgctcccatcctc
aactacccacctgattgcaaccctgagaaggagaacccaggaaccacagtgaagggggac
tgtggaaatccttctgtgggaatcttcttctttgtcatgtacatcatcgtgtccttcctg
attgttgtaaacatgtacattgccattattttggagaacttcagtgttgcaacagaggag
agtgctgatccgttgtgcgaggatgactttgagtccttctatgagatctgggagaagttt
gacccagatgcctcacagtttattacctttgccaagctgccggactttgcagatacactg
gaacatcctctacgcgtgcctaagcccaacataatcgagcttattgccatggatctaccc
atggtgagtggtgatcgtatccactgcttggacatcctgtttgcttttaccaagcgcgtc
ctgggtgacagcggtgatctggacatgatgcgtcagcagatggaggagcgcttcgtggca
gcgaacccttccaaagtgtcctatgagcctatcaccaccacgctacgccgcaagcaggag
gaggtgtcagccgtggtgatccagagggcgtaccgcgcccacctcacccgccggggtttc
gtctgcaaacgccggcctgccaacaacaagctggaaaacggagggacaaatcaggagaag
aaggaggacactccctctactgcatctctgccatcctacgacagcgtaaccaagcctgag
aaggagaagcaagacgacaacaatgagggaaagggtcgtaaggagaagggccgaaaccaa
aaagacgtcagggaatccaagtgttaa
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integrated database retrieval system
