Pangasianodon hypophthalmus (striped catfish): 113547624
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Entry
113547624 CDS
T05759
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113547624 (tbc1d4)
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113547624 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113547624 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
113547624 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
DUF3350
PID
DUF4600
DUF4806
Motif
Other DBs
NCBI-GeneID:
113547624
NCBI-ProteinID:
XP_026803841
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MEGAEDKGRGRGKERSFSLWYVGCSALDRRTTLPMLPWLVAEIRRKSESGPVQARLVQLS
LTPPVIRCVPANSSSSSVFIFEHKAQCISRFVHNSHDLAYFAYLIRSQPDDPECEMACHV
FKACDPDQVSEVISSIRQASKSALKEENKPRQEAEESFYNSQKFEVLYCGKVTVNHKKAP
STLIDDCIDLFRQHESERRRLRLLNGQRSIETPVVFTVGDDPLSASLSEASLTEINEKAG
GTRSAFPECIQEDSGFEQQEFRTRCNSLAGGLQKTPRETGAKVPTRRRHASAPNNVQPSD
ADKNRTMLFQVGRFEVNIISPDSKTVVLEKNFKDISFCSQGVKQTDHFGFICRDVLESGP
NQYICYVFQCASESLVDEVMLTLKQAFSTAAALQSSKTQIKLCEACPMHDLHKLCERIEG
LYPPRAKLAIQKYLSLLSDNEQADIFERVQKMKPSCDQEENELVILHLRQLCETKQKTHV
HIGEAPQNAVGSEASSVAGRNKLDVLKNKARSSLTSSLENIFSRGANRMRMRLGSMSSFD
RQDESPGDSPPGTPPATLEEDPDAPPFRRRAHTFSHPPIKKRISFTELPTQNKVPLHRQQ
SLAPELLQSSPVRVPRKRSVSEGESSFSLPSSFSTTTFLKSFYLGSFSSLASLPDSPKSN
GEDRSRRLSGCSTDSVTAVTTRRVSWRQKIFLRVASPMNKASASMHKADMDGSELLPLSP
RALQQEQNPLSGLLSSTQSLRGENGRRTTADYRALWKKAIHQQILLIRMEKENQRLEEAS
RDELHIRKMKLDYQEVGECPTEVQALWEKKLNVPCRTKVQWDKDEIHTALCQGVPKCRRG
EVWLLLSQQYRLRHHLPQRQQPPDTPYQDLLKQLTTQQHAILVDLGRTFPTHQYFSAQLG
AGQLSLYNLLKAYSLLDTEVGYCQGISFVAGVLLLHMSEEQAFDTLKFLMYDLGLRRQYR
PDMISLQIQMYQLSRLLHDYHRGLYSHLEEHEISPSLYAAPWFLTLFASQFPLGFVSRIF
DLLFVQGTEVIFKVALCLLSSHEGEILECDSFESIVDYLKTTIPALTQSQMEETITKALE
MDISKQLHAYEVEYHVLQDEMVDAAPLSEESDRLDKLEKTNAQLKKQNMDLLEKLQAARG
KIQSLENSVESFLARESQMKHMIRSLEQEKANYQKTIERMRSSLPADAADVEMTQLKMSS
NSKTKAANK
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcggaggacaaagggagagggagagggaaggagaggagcttctcgctgtgg
tatgtgggctgcagcgcgctggaccggcgcaccacgctgcccatgctgccgtggctggtg
gcagaaatccgcaggaagagcgagtccggtccggttcaggctcggctggtccagctctct
ctcacccctccagtaatccgctgcgtgcctgccaacagcagcagctcgtccgtctttata
tttgagcacaaagcgcagtgcatctcgcgcttcgtccacaacagccatgacctcgcctac
ttcgcctacctcatccgcagccagccggacgaccccgagtgcgaaatggcctgccatgtg
ttcaaggcgtgcgacccagaccaggtgtctgaggtcatcagcagcatccggcaggcctcc
aaaagcgcactcaaagaggaaaacaaacccaggcaggaggctgaggagtccttttacaac
tcacaaaagtttgaagtgctttactgtggcaaggtgacagtgaaccacaaaaaagcaccg
tccaccctgattgacgactgcatcgacctgtttcggcagcacgagtcagagcgcaggcgt
ctgcgcctcctgaatggccagcgctctattgagaccccggtggtgttcaccgtgggagac
gacccactcagtgcatcgctctctgaagcttcactcacagagataaatgagaaagcaggc
ggtacgcgcagtgccttccccgagtgcatccaggaggactcaggctttgagcagcaggag
ttccgcactcgctgcaacagcttggcaggtggcttacagaagactcctagagaaacggga
gccaaagtgccaacacgtaggagacatgccagcgcacctaacaatgttcagccctctgat
gcagacaagaatcgcaccatgttgtttcaggtggggcggttcgaggtgaatatcatcagc
cctgacagcaagacagtagtgctggagaagaatttcaaagatatctcgttttgctcccag
ggagtgaagcagacagaccactttgggttcatctgtcgtgatgtgctggagtcaggaccc
aaccagtacatatgctacgtgttccagtgtgccagtgagtctctggtggatgaggtgatg
ctgactctgaagcaggccttcagtacagctgcggcactgcagagctccaaaacccagatc
aagctatgtgaggcctgtccaatgcatgacctgcacaagctttgtgagcgaatcgaaggg
ctgtaccctcccagagcgaagctggccattcagaaatacctctccctgctgagcgataat
gagcaggcagacatttttgaacgtgtacagaagatgaagccaagttgtgatcaggaggag
aacgagctggtcattcttcacctcaggcagctgtgtgagaccaagcagaagacacatgta
catattggagaggctcctcagaatgcagtaggatcagaggcatcaagtgtagctggacgc
aacaagctggacgtgctgaaaaataaggcacgcagctccctgaccagctccctggagaac
atcttttcacggggtgcaaaccggatgcgcatgcgtctaggaagcatgagcagctttgac
cgacaagacgagtctcctggtgattctcctccagggactccccctgctaccttggaagag
gaccctgacgcccctccgttccgccgccgagcacacacctttagccaccctccaatcaag
aagaggatctctttcacagagttgccgacacagaacaaggttcctttgcacagacaacag
tctcttgcaccagagctgctgcagagcagcccggtgcgcgtgccaagaaaacgcagtgtc
tctgagggcgagtcctccttcagccttccctcctccttctccactaccactttcctgaaa
agtttttacctgggctccttcagctcactggcctccctgccggacagccccaagagtaat
ggagaggacagaagcaggaggctgtctggctgcagcactgactcggtgactgcagtgact
acacgcagagtgtcgtggcgtcagaagattttcctgagggtggcttcacccatgaacaaa
gcctcagcctctatgcacaaggctgatatggatggcagtgagctgttgccgctttctccc
cgtgccttacaacaggagcagaaccccctatctgggctgctctcctccactcagagcctg
agaggagagaacggacgccgcaccactgctgattatagggctctgtggaagaaggccatc
caccaacagattctccttatccgcatggagaaggagaaccagcgcttggaggaagcaagc
cgagatgagctacacatccgtaagatgaagctggactaccaggaggtgggggagtgtcct
acagaggtgcaagctctctgggagaaaaagctaaatgtgccttgcaggaccaaagtgcag
tgggacaaagacgagatccacactgctctctgccagggtgtcccaaaatgtcggcgaggt
gaggtgtggctcctcctctctcagcagtatcgcctgcgtcatcatctacctcagcggcag
cagcctcctgatacgccctaccaggatctgctcaagcagctcaccacacagcagcatgcc
atcctggtggacctgggtcgcacattccccacgcatcagtacttcagtgcacagctgggc
gcaggccaactgtctctttataacctgctgaaggcctactctctactggacactgaggtg
ggctactgccagggcatcagctttgtggctggagtgctgctgctgcacatgagcgaggag
caggccttcgacacgctaaagtttctaatgtacgatctggggctccggcgtcaataccgg
cctgacatgatctccctgcagattcagatgtaccagttgtcccggctactgcatgactac
caccgtggtctgtattcgcacctggaggagcatgagatcagccccagcctgtatgctgct
ccttggttcctcacactcttcgcctctcagttccccctcggcttcgtctcccgcatcttc
gacctgctatttgtccagggcacagaggtgatttttaaagtggccctgtgtttgctgagc
agccatgaaggagagatactggagtgtgacagttttgagagcattgtagactaccttaag
accaccatacctgccctcacacagagccagatggaagagacaatcaccaaggctttagag
atggacatctccaagcaactgcacgcctatgaggtggagtaccacgtcctacaggacgag
atggtggacgccgctccactttcagaggagtcagacaggctggacaaactggagaagacc
aatgcccagctcaaaaagcaaaatatggatctgctagagaaactgcaggcagcacggggg
aaaatccagagtctagagaacagtgtagagagcttcctggcacgtgaaagccagatgaag
cacatgatccgctcgctggagcaggagaaggccaactaccagaagaccattgagcgcatg
cgcagcagcctccctgcagacgcagctgacgtggagatgacccagctgaagatgagcagc
aacagcaaaaccaaagcagccaacaaataa
DBGET
integrated database retrieval system
