Pseudoalteromonas issachenkonii: PI2015_1169
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Entry
PI2015_1169 CDS
T04164
Name
(GenBank) Exonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pia
Pseudoalteromonas issachenkonii
Pathway
pia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PI2015_1169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pia03400
]
PI2015_1169
Enzymes [BR:
pia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PI2015_1169
DNA repair and recombination proteins [BR:
pia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PI2015_1169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
SH3_13
Viral_helicase1
Helicase_RecD
AAA_22
UvrD-helicase
SLFN-g3_helicase
T2SSE
nSTAND3
RecD_N
UvrD_C
AAA_16
AAA_28
NTPase_1
CbiA
Mg_chelatase
MeaB
TrwB_AAD_bind
TPP_enzyme_N
AAA
SRP54
Motif
Other DBs
NCBI-ProteinID:
ALQ54477
LinkDB
All DBs
Position
I:1302839..1304857
Genome browser
AA seq
672 aa
AA seq
DB search
MSDLNQQPGLFDDFDDAPVDESALLNQQLADSVTQTPKVVPLLSYLTEQHRVRVVDVKLA
ELLSGNNTEHDYDELFYIILMLCLSQQSQHSCLTLTEVDWANPFNLRQSDFTKLEGTVPD
TLTPFSDDFTTEAAISYLHAHHSVGDHKPLQLFNQRLYFSRLAGYEQTLAQRLLAMSERQ
LNIDDAVLTELLTRYFPDNPTLDIDWQKVACAIAATKGFSVITGGPGTGKTTTVTKLLAI
LQSLYQAAPLSIKLVAPTGKAAARLTESILGAKNKLTEIPADINALIPQSAQTIHRLLGV
KPFTNKFRHDKSNPLHVDVLIIDEASMVDLSLMAKLIEALPAHARLILLGDKDQLASVDT
GSVMSDLCQGLVLGQTPQYSKARCEQLNKVCFNGAAKLGAQNQSEFKLADCIAFLQHSYR
FDAKSGIGQLALAVNTNDRGILNYVEQHSTQGHFSDVILDYDFVSTPIEKLINSAASHYG
DYLTLIAQGASVAKVHEAFARYQLLAAVREGDYGVNSLNQRIERVLQQQGLISVNPNQRH
YTGMPIMISQNDYQLKLFNGDIGILMPDDSGQLKALFIDEQGNERAFSPARLPAHDKVYV
MTIHKSQGSEFSYTAMVLPPLKQASVGINRQLVYTGITRAKQTFELVADKKVLQLAMGKS
VSRASGLYERLV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttaaaccaacaacctggtttgtttgatgactttgacgacgcgcctgttgat
gagtcggcgctactcaatcaacaactagcggactctgttactcaaacacctaaagttgtg
ccgctgcttagctatttaactgagcagcatcgcgtacgtgttgtggatgtaaagctggcc
gaattactcagtggtaacaatactgagcatgattatgacgaattattttatattatttta
atgctgtgtttatcacagcaaagccagcatagttgtttaactctaacagaggttgattgg
gctaatccgtttaatttacgccaaagcgactttactaaattagaaggcaccgtacctgac
actctcaccccatttagtgacgattttacgactgaggcagcaataagttacttacacgcg
catcacagtgtgggggatcacaagccgctgcaattgtttaatcagcggttgtatttttcg
cgtttagcagggtatgagcaaactttagcgcagcgattactggcaatgagtgagcgacaa
ctcaatattgatgatgcagtccttactgagttattaacacgctactttcctgataatcca
acacttgatattgattggcaaaaggtcgcttgtgctattgctgcaacaaagggctttagt
gtgatcacaggcgggcctggcacaggtaaaaccaccacggtgacaaagctgttagccatt
ttacagtcgttatatcaggctgcaccattgagcataaaattggtggcacccacaggtaaa
gcagcggcgcgattaacagagtcaattttaggggctaaaaataagctcacagaaataccg
gctgatattaatgcgttgatcccgcaaagtgcgcaaaccattcatcgtttgttgggagtt
aagccatttactaataaattcaggcacgataaaagcaatccgttgcatgttgatgtattg
attattgatgaggccagtatggtcgatttatcgctcatggctaaattaattgaggccttg
ccagcgcatgcccgattgattttacttggcgataaagaccaactcgcctcggttgatact
ggcagtgtaatgagtgatttatgccaaggtttagtgcttgggcaaacaccgcaatattcc
aaagcacgctgtgagcaattaaataaggtgtgttttaatggcgcagctaaacttggcgcg
caaaatcagagtgagtttaaactggctgattgcattgcctttttacaacatagttatcgc
tttgatgccaaaagtggcataggccaattggctttggctgttaataccaatgatcggggt
attttaaattacgttgaacaacacagtacgcaagggcattttagcgatgttattttagac
tacgattttgtctctacaccgattgaaaaacttataaacagcgcggcaagtcactacggt
gattatttaacactgattgcccaaggggctagtgttgccaaagtgcatgaggcttttgcc
cgctatcaattacttgcagcagtgcgtgaaggcgattacggcgttaatagtttaaatcaa
cgtattgagcgtgtattgcaacagcaagggttaattagcgttaaccctaatcagcggcat
tacacgggtatgcctattatgattagccaaaacgattatcaacttaaactttttaacggc
gatataggtattttaatgcctgatgacagtggccaactcaaagcactgtttattgatgag
cagggtaatgaacgtgcattttcacctgcacgactcccagcgcacgataaagtgtatgtt
atgaccattcataaatcgcaaggctcagagtttagttacactgctatggtattgccacca
cttaaacaagcgagcgtcggtattaaccggcaattagtgtataccggtattacccgtgca
aagcagacctttgagctggtagcagataaaaaagtgctgcaactggcgatgggtaaaagt
gtgtcacgggcatcaggactctatgagcgattagtgtaa
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