Pseudoalteromonas issachenkonii: PI2015_2003
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Entry
PI2015_2003 CDS
T04164
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pia
Pseudoalteromonas issachenkonii
Pathway
pia03030
DNA replication
pia03430
Mismatch repair
pia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PI2015_2003
03430 Mismatch repair
PI2015_2003
03440 Homologous recombination
PI2015_2003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pia03032
]
PI2015_2003
03400 DNA repair and recombination proteins [BR:
pia03400
]
PI2015_2003
Enzymes [BR:
pia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PI2015_2003
DNA replication proteins [BR:
pia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PI2015_2003
DNA repair and recombination proteins [BR:
pia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PI2015_2003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FAN1_HTH
VRR_NUC
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ALQ55288
LinkDB
All DBs
Position
I:complement(2236580..2238736)
Genome browser
AA seq
718 aa
AA seq
DB search
MRKELPAKYYLAHFKELIGFVSDKCMHLLEQKHITFINKINTLDEQSQCMLARIYSRKPY
LVQTQSLNYEEIISPYQALFNLKTAGLICDPSQADAKQLLSHLTKPALIELLAQQELPPL
FKKSAAKSCLVEVAISFFESKPERLSHLYNQYVINNRDECYQYFEFLYIGRLSAGDVNHQ
NRFVLRDLGVTPVRQGHHESLSRFDSIEEAQSNYVLNRFRLAVKNAKDDNENETLAKQLI
NELAVGAVARELKNKLLVILYKQLKTTNPVLAFDVLNACEDDAHALEIQIREQYRLGNKE
WVKAQLEKIIENPLTDELLYFADDFLMRKFNKQTRSRLSEMLASTRCIIEVDELYRGDVE
LGVSDHYTRQGKQVFYTENTLWQSLFALVFWQELFIETPTPPCNEFDIYPQALKTDTFYL
NQSSQIEARLAACNSAQKLLSLVCNHAAKYYEQPNGLFRWHKDVLKPLEMLILNSPINAL
LSHLKNMAKNYRQLKDGYPDLMIVDNSAVHFEEVKAPGDKLKRNQLVSIDNLKNSGFKVN
IAAVKWYVDPNRIYSVVDIETTGGLKGGNRITEIGIVKVKQGEIVDTWTTLINPERPIPR
FITKLTGINDAMVSDAPIFSDIASTLLDKLSGSIFVAHNVNFDYGFIKKELEGLGINFKM
PKLCTVVESRKAFKGLKSYSLGNLSAHFNLDLTNHHRALDDAKAAAQLLLLVQQTDSQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagagttaccagcaaaatattatttggcacattttaaagagctaataggcttt
gtgagtgataaatgtatgcatttacttgagcaaaagcacattacatttattaataaaata
aacaccctcgacgagcaaagccaatgcatgctagcacgtatttattctcgtaaaccttat
ttagtgcaaactcagtcattaaattatgaagagattatttcgccttatcaggcacttttt
aatttaaaaacagctgggttaatctgtgacccctcacaagcagacgctaagcaactgctt
agccatctaacaaagccggccttaattgagttgttagctcaacaagagctgccaccacta
tttaaaaaaagtgctgctaaaagttgtttagttgaagtcgctatttcattttttgaatct
aagccagagcgtctttcgcatttgtataatcagtacgtgatcaataatagagatgagtgt
taccagtattttgagtttttgtatattggcaggctcagtgccggtgatgtgaatcatcaa
aaccggtttgtactaagagatttaggggtaacccctgttaggcaaggacatcatgaaagt
ttgtctcgctttgactcaattgaggaagcgcaatctaactatgtgttaaaccgttttcgg
ttagccgttaaaaacgcgaaagatgacaatgaaaatgagacgttagcaaaacagttaata
aatgaattagcagtaggggctgtagctcgagagctaaagaataagttattggtcatactt
tataagcaactaaaaacaactaaccctgtattagcgtttgatgtacttaatgcctgcgag
gatgatgcgcacgcactagaaattcaaataagagagcaataccgtttaggtaataaagaa
tgggtaaaggcgcaacttgagaaaattatagaaaatccgctcaccgatgagttactgtac
tttgcggatgactttttaatgcgcaaatttaacaagcaaacacgctcacggcttagtgaa
atgttagccagtacacgctgtattatagaagttgatgaactttaccgtggcgatgttgag
ttaggtgtaagtgatcactacactcgtcaaggcaaacaggttttttatactgaaaatact
ttgtggcaaagcttatttgcgctggttttttggcaagaactctttattgaaaccccgaca
ccgccttgtaatgaatttgatatttacccgcaagccttaaaaacagacaccttttattta
aatcaatcctcacaaatagaagcgcggctagctgcgtgtaatagtgcccagaaattgctg
agtttagtgtgtaaccatgcagcgaagtattatgagcaaccaaatggcttatttagatgg
cacaaagatgtattaaagccattagagatgcttattttaaacagcccgataaatgcgcta
ttaagccatttaaaaaacatggcaaaaaactaccgacaattaaaagatggttaccccgat
ttaatgattgttgataacagcgcagttcattttgaagaggtaaaagcgcccggagacaag
cttaaaagaaaccagctagtgagcatcgataatttaaaaaatagtggatttaaagttaat
attgcagcggtgaagtggtatgtagaccctaaccgtatttatagtgtggtagatattgaa
actacaggaggcctaaaaggcggtaaccgcattaccgaaattggtattgttaaagtaaag
cagggcgaaatagttgatacatggaccacattgataaacccagagcgtcccatcccgcgt
tttattaccaaactaactggtattaacgacgccatggtaagtgatgcgcctatatttagc
gacattgcttcgactttattagataagctttcgggtagtatttttgtcgctcacaatgtt
aattttgattatggttttattaaaaaagagcttgaggggctgggaatcaactttaaaatg
ccaaaactatgtaccgttgttgaatcacgtaaagcatttaagggattaaagtcgtattcg
ctgggaaatttatctgcacactttaatttagacttaaccaaccatcaccgtgcattagac
gatgccaaagcggccgcgcagttattattactggttcagcaaacggacagtcagtga
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