Paenibacillus ihbetae: BBD41_25850
Help
Entry
BBD41_25850 CDS
T05154
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pib
Paenibacillus ihbetae
Pathway
pib00300
Lysine biosynthesis
pib00550
Peptidoglycan biosynthesis
pib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pib00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBD41_25850
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BBD41_25850
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pib01011
]
BBD41_25850
Enzymes [BR:
pib01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BBD41_25850
Peptidoglycan biosynthesis and degradation proteins [BR:
pib01011
]
Precursor biosynthesis
Amino acid ligase
BBD41_25850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ANY75725
UniProt:
A0A1B2E6W4
LinkDB
All DBs
Position
5801797..5803308
Genome browser
AA seq
503 aa
AA seq
DB search
MNLKSLTDGLILKTITGSTSREITNLDTDSRNIKPGGLFICVPGFRVNGHDYARDAVANG
AVAVVAEQDLPDLPGDVTCIKVPDVRRALPILANAFFDNPTGRLRLIGITGTNGKTTTTH
MVEKILNDCGRKTGMIGTLYMRIGEHTEPAQNTTPDTIQLQRYLHTMAALGGEYAVLEVS
SHGLDMGRVRGSDFQTVVFTNLSHDHLDYHLDMDSYRSTKELLFSQLGNSSRDMLKKAVL
NADDEASAYYAKRTSAQVVTYGIKQPAHIRAEDIRHASEGCSFMVRSPWGDGRFSLKVHG
MYNVYNALAAIAVGLVEGLHLEDIRHSLEQFAGVQGRFQEIQTNQSFRVVVDYAHNPDGL
KATLQSARTITSGKMICVLGCRGERDRLKRPIMADIAASHSDYVFFTTDNPFSEDPETIL
AEMLNGLNDRESVNWEVVLNRKEAIRRAVKMAGDEDRIIITGRGHERRYVSGGTTELFSD
EEVVLHSLAGSGEGIQTANAPNL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaaatctttgacggacgggctgattctgaagacgattaccggcagcacttca
cgagagataacgaatctggataccgactcccgtaatataaagccgggcggtctgtttatt
tgcgtacccggatttcgtgtcaatggacatgactatgcccgcgatgccgttgcgaatgga
gccgttgccgtcgttgcggagcaagacctgccggatctgccaggggatgtaacctgtatc
aaggtcccggatgtacgccgggcactgccgattcttgcgaatgctttttttgataacccc
accgggaggctgaggctgatcggcataacaggaacaaacggcaagacgacgaccacccat
atggtggaaaagatattgaatgactgcgggcgaaaaacaggcatgatcgggacgctgtac
atgcggatcggcgagcatacggagcctgctcaaaatacgacgccggatacgatccagctc
cagcgttacttgcataccatggctgcgcttggaggggaatatgccgtcctggaagtatcc
tcgcacggtctggatatgggacgggtccgcggatctgattttcaaaccgttgtgtttacg
aatttgtcccatgatcatctggactatcatctggatatggacagctaccgcagcacaaag
gagcttctcttctcccaattgggcaacagcagccgggatatgctgaagaaagccgtgctg
aacgccgacgacgaggcatcggcgtattatgcgaagcgaacatcggcgcaggtcgtaacc
tatggcataaagcagcctgcacatatacgcgccgaggatatccgccacgcttcggaggga
tgcagctttatggtccgttctccttggggggacgggcggttttccctgaaggtccatgga
atgtacaatgtatataatgcgctggcagcgatcgccgtcggtttagtggaagggcttcat
ttggaggacattcggcacagtcttgagcaatttgcaggagttcagggccgttttcaagaa
atacaaaccaatcaaagctttcgggtcgtggtggattatgcccataatcccgacgggctg
aaggcgactctgcagtcggcaagaaccattacttcgggcaaaatgatctgtgttctcggc
tgcagaggggagcgtgatcgactgaagaggcccatcatggctgatatcgccgcttcgcat
agtgactatgtgttttttacgaccgacaatccgttctcagaggatccggaaacgatcctg
gcggagatgctgaacggtctgaatgaccgggaatcggtcaattgggaggtcgttctgaat
cggaaagaagcgatccggcgggcggtgaagatggcaggggatgaggaccgtatcatcatc
accgggcgcggacatgaacgacgttacgtctctggcggaacgaccgaattgttcagcgat
gaggaggtcgtgctccattcccttgccggatccggcgaaggcattcagacggcgaacgcc
ccaaacttgtaa
DBGET
integrated database retrieval system
