Scheffersomyces stipitis: PICST_72398
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Entry
PICST_72398 CDS
T01023
Symbol
SYF2
Name
(RefSeq) henylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS)
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PICST_72398 (SYF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pic01007
]
PICST_72398 (SYF2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_72398 (SYF2)
Enzymes [BR:
pic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
PICST_72398 (SYF2)
Amino acid related enzymes [BR:
pic01007
]
Aminoacyl-tRNA synthetase
Class II (U)
PICST_72398 (SYF2)
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PICST_72398 (SYF2)
Prokaryotic type
PICST_72398 (SYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
4839121
NCBI-ProteinID:
XP_001384761
JGI:
72398
UniProt:
A3LV88
LinkDB
All DBs
Position
5:513342..515159
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AA seq
590 aa
AA seq
DB search
MPTIPVDKQDLYDLLGQSYTTEEFDELCFEYGLELDEDTTDDCQPGERPQLKIEVPANRY
DLLCIEGIAQALNEFLGRAEAPKYTLKPSSPIVTLTIKETTAGVRPYAAGAILRNIKFDQ
RRYESFIALQDKLHSNICRNRTLVAIGTHDLDTLSAPFTYEGLTHEDISFVPLNQEKLLN
GKQLMEFYDKDKNIGKYLHIIRDNDRYPYMLDSNRTVASLPPIINSNHSKITLDTKNVFI
DITGTDRTKTDIVLNQVVAMFSAYCETPFEIEPVQVISEHNGESRITPNVTPRLAQAEIE
YINSCTGLNYDAQGICDLLKKMSLVAKPSSTKGLIDVEIPITRPDVLHQCDIMEDVAVAY
GFNKLTKTKPQSESLVASPLPVNKISDILRLASSQSGYLEVLPLTLCSHDENFKFLRTVD
DNTRAVKLENPKTVEYQVVRTTLLPGILKTIKENRKHSLPIRVFEAGDIVLKNPELERGA
YNQRNWSAIYAGKTSGFEFVQGLLGKIMQTMRTPWLENPKENKSRGYWIEEDKENPTFFP
GRGAKVFFRNAEGAAEQEIGAIGVLHPEVMTAFEIPYAASSVEINAEVFL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccatccctgttgacaagcaagatctctatgacctcttgggccagagttacacc
actgaggagttcgacgaattgtgcttcgaatatggtttggaacttgacgaagacaccact
gacgattgtcagcctggagagagacctcagttgaagattgaggtcccagccaacagatac
gacttgttatgtatcgaagggattgcccaggccttaaatgagtttttaggaagagccgag
gccccaaagtacaccttgaagccatcgagtcctatagttactttgactattaaggaaacc
actgcaggtgttcgtccatatgctgctggagccatcttgagaaacatcaagtttgaccag
cgtcgttatgagtctttcattgccttgcaagacaagttgcactcgaacatctgtcgtaac
agaacacttgtagctattggtactcacgacttggacactttgagtgctcctttcacgtat
gaaggtttgacccatgaagatatcagctttgtgcctttgaaccaggaaaagttacttaac
ggtaaacaattgatggagttctacgataaggacaagaacattggcaagtacttgcacatc
atcagagacaacgacagatacccttacatgttggactccaacagaaccgtagcctctttg
cctcccatcatcaactcgaatcactccaagattacattggacaccaagaacgtctttatt
gacattacaggaactgacagaaccaaaacggatattgttcttaaccaggtcgtagccatg
ttttctgcctactgtgagacaccttttgaaattgaacctgttcaggtaataagtgaacat
aacggagaatcacgtattactcctaatgtcacaccaagattggcacaggcagagattgaa
tacatcaattcatgtactggtttgaactacgatgcccagggcatctgtgacttgttgaag
aagatgtctcttgttgccaagccatcttctactaaaggacttattgacgtagagattccc
atcaccagaccagacgttttgcaccaatgtgacattatggaagacgttgctgtcgcctac
ggcttcaacaagttgacaaagacaaagccacaaagtgagtctttagttgcttctccatta
ccagtgaataagatctctgacatcttgagattggcctcgtcacaatcgggttacttagaa
gtgttgcctcttacgttgtgttctcacgacgaaaatttcaagtttttgagaactgtggac
gacaacactagagccgtcaagttggaaaaccccaagaccgtagagtaccaagtagtcaga
accacgttgttgccaggtatcttgaagacaataaaggagaacagaaagcattctttgcct
atcagagtctttgaggccggcgatatcgttttgaagaacccagagttggaaagaggtgcc
tacaaccaacgtaactggtcagctatctacgccggaaagacgtctggtttcgagtttgtg
caaggtttgttgggcaaaataatgcagactatgagaactccctggttagaaaaccccaag
gaaaacaagagcagaggctactggatagaagaagacaaagaaaaccctaccttcttccct
ggcagaggtgccaaggttttctttagaaacgccgaaggtgctgcagaacaagaaattggt
gccattggtgttttgcacccagaggtgatgacagcatttgagattccttatgctgcttca
tctgtggaaatcaacgctgaagtattcttgtag
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