KEGG   Pigmentiphaga sp. H8: EGT29_14905
Entry
EGT29_14905       CDS       T05719                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
pig  Pigmentiphaga sp. H8
Pathway
pig03030  DNA replication
pig03410  Base excision repair
pig03420  Nucleotide excision repair
pig03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EGT29_14905 (ligA)
   03410 Base excision repair
    EGT29_14905 (ligA)
   03420 Nucleotide excision repair
    EGT29_14905 (ligA)
   03430 Mismatch repair
    EGT29_14905 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pig03032]
    EGT29_14905 (ligA)
   03400 DNA repair and recombination proteins [BR:pig03400]
    EGT29_14905 (ligA)
Enzymes [BR:pig01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     EGT29_14905 (ligA)
DNA replication proteins [BR:pig03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EGT29_14905 (ligA)
DNA repair and recombination proteins [BR:pig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     EGT29_14905 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EGT29_14905 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     EGT29_14905 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      EGT29_14905 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT HHH BRCT_2 5_3_exonuc RNA_pol_A_CTD POLH-Rev1_HhH DZR_2
Other DBs
NCBI-ProteinID: AZG09045
UniProt: A0A3G8GLJ8
LinkDB
Position
complement(3136986..3139043)
AA seq 685 aa
MVSGVDRENQAMQRAAQLRQELALHNARYYVMDDPLISDAEYDALFAELVKLEQEFPLLA
TPDSPTQRVGGAPLSAFGSVRHAVSMLSLNNAFDDEDIQAFDKRVRDGLETESAVEYACE
LKLDGLAVSLRYEDGKFARAATRGDGQTGEDITANIRTIRSIPLTLAGPVPDVLEVRGEV
LLFRKDFERLNDAQREAGEKVFINPRNAAAGSLRQLDPRITARRPLRFFAYGWGEIRGSL
PGKEARADAPPFDTHMGMLDWLQELGMPVNRERQLVSDAAGLLAFYRRVEGLRASLPYDI
DGVVYKVNALEAQRALGFVSRAPRFAVAHKFPAEEATTELLGIEVQVGRTGAITPVARLK
PVFVGGVTVTNATLHNEDEIERKDVRIGDTVVVRRAGDVIPEVVTPVLDKRPANARKFVM
PSQCPVCGSAIERPEDEIIARCTGGLFCAAQRKQALWHAAQRRALDIEGLGEKLIDQLVE
RGRVHTLADLYTLNEEELAGMDRMGEKSARNLVESIAATRTPPLGRFLFALGIRHVGEST
ARDLARHFGNLDAVMNAAEAELLAVPDVGPVVAASIFRFFAEPHNREVVADLLRNGVTPG
TETVVDRTAGPIGGKIFVLTGTLPTLAREDAAELIRAAGGKVTGSVSKKTHYVVAGADAG
SKLAKAQELGIAVLDEDGLKALLQS
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggtgtcgggggtcgatcgggaaaaccaggccatgcagcgggcggcgcagttgcgccag
gagctggccttgcacaacgcccgttactacgtgatggacgatccgctgatcagcgacgcc
gagtacgacgcgctgttcgcggagctggtcaagctcgagcaggagttcccgctcctggcc
acgcccgattcccccacccagcgggtggggggcgcgccgctgtcggctttcggttcggtg
cgccacgcggtgtccatgctgtccctgaacaatgccttcgacgacgaggacatccaggcc
ttcgacaagcgggtgcgcgacggcctggaaacggaatccgccgtcgagtacgcctgtgaa
ctgaagctggacggactggccgtcagcctgcgctacgaagacggcaagtttgcacgggcc
gcgacgcggggcgatggacagacgggcgaagacatcaccgccaacatccggaccatacga
tccatcccgctcaccttggcgggccccgtgcccgacgtgctggaggttcgcggcgaggtg
ctgctgttccgcaaggatttcgagcgcctgaacgacgcccagcgcgaagccggcgagaaa
gtcttcatcaatccccgcaatgccgcggcgggcagcctgaggcagctcgatccgcgcatc
accgcccgccgtccgctgcgattcttcgcctacggctggggcgagatacgcggcagccta
ccgggcaaggaggcccgtgccgacgcgccgcccttcgatacccacatgggcatgctggac
tggctgcaggaattgggcatgccggtcaaccgcgagcgccagctggtgtcggacgcggcc
ggtttgctggcgttctaccggcgggtcgaggggctgcgagcctcgctgccctatgacatc
gacggcgtggtctacaaggtcaacgcgctcgaggcgcagcgcgcgctggggttcgtttcg
cgcgccccgcgctttgccgttgcccacaagttcccggcagaagaagccaccaccgagctg
ctcggcatcgaggtgcaggtcggccgcaccggggccatcacacccgtggcgcgcctcaag
ccggtgttcgtgggcggcgtcacggtcaccaacgcgaccctgcacaacgaggacgagatc
gagcgcaaggacgtgcgcatcggcgatacggtggtggtccgccgcgccggggacgtcatt
cccgaggtcgtgacgccggtgctggacaagcgtcccgccaacgcccgcaagttcgtcatg
cccagccagtgcccggtgtgcggatcggccatcgagcggcccgaggacgaaatcatcgcg
cgctgcaccggcggcctgttctgcgccgcgcagcgcaagcaggcgctgtggcatgccgcc
cagcgccgcgcgctggacatcgaagggctgggcgagaaactgatcgaccagctggtcgag
cgcggccgcgtgcacacgctggccgacctctacacgctgaacgaggaagaactggccggc
atggaccgcatgggcgagaagtccgcgcgcaacctggtcgagtccatcgccgcgacccgt
acgccgccgctgggccggtttcttttcgcgctgggcatacggcacgtgggcgagtccacg
gcccgcgacctggcgcgccatttcggcaacctggacgcggtgatgaacgcggccgaggcc
gaactgctggcggtgccggacgtcggacccgtggtggccgcgtccatctttcgcttcttc
gccgaaccgcacaaccgcgaggtcgtggccgacctgctgcgcaacggcgtgacgcccggc
acggaaaccgtcgtggaccgcacggcgggccccataggcggcaagatcttcgtgctgacc
ggcacgctgcccacgctggcccgcgaggacgcggccgaactgatacgcgccgccggcggc
aaggtcaccggctcggtatccaagaagacccactatgtcgtcgccggcgccgacgccggc
agcaagctcgccaaggcccaggagctcggcatcgccgtgctcgacgaagacggcctgaag
gccttgctgcagtcttga

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