Psychromonas ingrahamii: Ping_0677
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Entry
Ping_0677 CDS
T00450
Symbol
rpoS
Name
(GenBank) RNA polymerase, sigma 38 subunit, RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pin
Psychromonas ingrahamii
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pin03021
]
Ping_0677 (rpoS)
Transcription machinery [BR:
pin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ping_0677 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_Crp_2
DUF2316
LacI
MaoC_dehydrat_N
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
ABM02530
UniProt:
A1SSR5
LinkDB
All DBs
Position
864787..865755
Genome browser
AA seq
322 aa
AA seq
DB search
MIKDLKLESKKSLPFDLDENADTDTDTIDDEDFSAAKIAVANEVKSMDATQLYLGEIGFS
PLLTAEEEVYYARRLLRGDQVSRKRMIESNLRLVVKISRRYNNRGLSLLDLVEEGNLGLI
RAVEKFDPEKGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKKLNVYLRTARELTHT
LTHEPTAEEIAEVLGVSAKEVSKILKLNERISSVDIPIGNNSDKELLDIIPDRKEASPEN
ELQEADMKLRIVKWLEDLNPKQREVLARRFGLLGYEAATLENVGKEIGLTRERVRQIQVE
ALKYLRDVLSEQGLSIESLFQV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgattaaggatttaaaattagagagcaaaaaaagtctcccttttgatctggatgaaaat
gcagatacagatacagatacaattgatgatgaagattttagtgccgctaagatagctgtt
gctaatgaagtaaaaagcatggatgcaactcaactttatttaggtgaaattggtttctcg
ccactattaacagcagaagaagaagtttattacgcccggcgtttactgcgcggtgatcaa
gtatcacgtaaacgcatgatagaaagtaatttacgcctggtagtgaaaatttcccgtcgt
tataataatcgtggattatcattattagatttagttgaagagggtaacctagggcttatt
cgggctgttgaaaaatttgatccggaaaaaggctttcgcttttcaacctatgcaacctgg
tggatacgtcaaacgattgaacgcgcgataatgaatcaaacccgtactattcgtttgcct
atccacatagtaaaaaaattaaatgtgtatttacgaactgcccgtgaattaacacacacg
cttactcacgaaccaacggctgaagagatcgccgaagttttgggagtctccgcgaaagaa
gtctctaagattttaaaacttaatgagcgtattagttccgttgatatccccataggaaat
aattctgataaagaattattggatattattccagatcgaaaagaggcttcaccggaaaat
gaactgcaagaggctgatatgaaactgcgtattgttaagtggttagaagaccttaatcct
aaacagcgtgaagtattagcaagacgatttggtttgttaggttatgaagctgcaacactt
gaaaatgtggggaaagagatcggtctgacacgcgaacgtgtgcggcagatacaagttgaa
gcgctaaaatatttacgtgatgtactctctgagcagggtttatcaatcgaatcattgttt
caagtttag
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